BLASTX nr result

ID: Dioscorea21_contig00031412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031412
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containi...   248   1e-63
dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containi...   244   2e-62
gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japo...   244   2e-62
ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group] g...   244   2e-62
ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [S...   241   8e-62

>ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20770-like
            [Brachypodium distachyon]
          Length = 805

 Score =  248 bits (632), Expect = 1e-63
 Identities = 121/185 (65%), Positives = 146/185 (78%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    ELFEYMLRSEEKPDDVTFISVLTACSHVGLIDEGIKYLNSMEK-HGIKPLADHYTCVIDS 177
            +LFEYML +E++PD VTFI+VLT CSH GL+DE I + NSME  +GI PLA+HYTC+ID 
Sbjct: 604  DLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDG 663

Query: 178  LGRAGRLMEAEALVDRMPFKDDPIIWEVFLSSCAVHGNARLGRKAAEQLFRLDPHNSAPY 357
            LGRAGRL+E EAL+D MP KDDPI+WEV L++CAVH NA LG  AA+ LFRLDP N +PY
Sbjct: 664  LGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPY 723

Query: 358  VLLSNIYAALGQWNDASAIRALMSDRGIVKDRGYSWIYHKDGVATFLV-DDQAVTNCKAD 534
            VLLSNIYA+LG+  DAS +RALMS RG+VK RGYSWI HKDGV  F+V DD      ++ 
Sbjct: 724  VLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFMVADDLQTDGGESK 783

Query: 535  SFSNE 549
             FSN+
Sbjct: 784  MFSNK 788


>dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group] gi|218190136|gb|EEC72563.1|
            hypothetical protein OsI_05996 [Oryza sativa Indica
            Group]
          Length = 803

 Score =  244 bits (622), Expect = 2e-62
 Identities = 120/185 (64%), Positives = 146/185 (78%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1    ELFEYMLRSEEKPDDVTFISVLTACSHVGLIDEGIKYLNSMEK-HGIKPLADHYTCVIDS 177
            ELFEYML +E+KPD VTFI+VLT CSH GL+D+ + + NSME  +GI PLA+HYTC+ID+
Sbjct: 605  ELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDA 664

Query: 178  LGRAGRLMEAEALVDRMPFKDDPIIWEVFLSSCAVHGNARLGRKAAEQLFRLDPHNSAPY 357
            LGRAGR +E EAL+ +MP KDDPIIWEV L++C VH NA LG+ AAE LFR+DP N +PY
Sbjct: 665  LGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPY 724

Query: 358  VLLSNIYAALGQWNDASAIRALMSDRGIVKDRGYSWIYHKDGVATFLV-DDQAVTNCKAD 534
            VLLSNIYA+LG+  DASA+RALMS+RG+VK RGYSWI  KDGV  F+V DD      +  
Sbjct: 725  VLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDLGADGGELT 784

Query: 535  SFSNE 549
             FSNE
Sbjct: 785  MFSNE 789


>gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
          Length = 518

 Score =  244 bits (622), Expect = 2e-62
 Identities = 120/185 (64%), Positives = 146/185 (78%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1   ELFEYMLRSEEKPDDVTFISVLTACSHVGLIDEGIKYLNSMEK-HGIKPLADHYTCVIDS 177
           ELFEYML +E+KPD VTFI+VLT CSH GL+D+ + + NSME  +GI PLA+HYTC+ID+
Sbjct: 312 ELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDA 371

Query: 178 LGRAGRLMEAEALVDRMPFKDDPIIWEVFLSSCAVHGNARLGRKAAEQLFRLDPHNSAPY 357
           LGRAGR +E EAL+ +MP KDDPIIWEV L++C VH NA LG+ AAE LFR+DP N +PY
Sbjct: 372 LGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPY 431

Query: 358 VLLSNIYAALGQWNDASAIRALMSDRGIVKDRGYSWIYHKDGVATFLV-DDQAVTNCKAD 534
           VLLSNIYA+LG+  DASA+RALMS+RG+VK RGYSWI  KDGV  F+V DD      +  
Sbjct: 432 VLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDLGADGGELT 491

Query: 535 SFSNE 549
            FSNE
Sbjct: 492 MFSNE 496


>ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
           gi|113535536|dbj|BAF07919.1| Os02g0167200, partial
           [Oryza sativa Japonica Group]
          Length = 526

 Score =  244 bits (622), Expect = 2e-62
 Identities = 120/185 (64%), Positives = 146/185 (78%), Gaps = 2/185 (1%)
 Frame = +1

Query: 1   ELFEYMLRSEEKPDDVTFISVLTACSHVGLIDEGIKYLNSMEK-HGIKPLADHYTCVIDS 177
           ELFEYML +E+KPD VTFI+VLT CSH GL+D+ + + NSME  +GI PLA+HYTC+ID+
Sbjct: 328 ELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDA 387

Query: 178 LGRAGRLMEAEALVDRMPFKDDPIIWEVFLSSCAVHGNARLGRKAAEQLFRLDPHNSAPY 357
           LGRAGR +E EAL+ +MP KDDPIIWEV L++C VH NA LG+ AAE LFR+DP N +PY
Sbjct: 388 LGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPY 447

Query: 358 VLLSNIYAALGQWNDASAIRALMSDRGIVKDRGYSWIYHKDGVATFLV-DDQAVTNCKAD 534
           VLLSNIYA+LG+  DASA+RALMS+RG+VK RGYSWI  KDGV  F+V DD      +  
Sbjct: 448 VLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDLGADGGELT 507

Query: 535 SFSNE 549
            FSNE
Sbjct: 508 MFSNE 512


>ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
            gi|241933187|gb|EES06332.1| hypothetical protein
            SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  241 bits (616), Expect = 8e-62
 Identities = 118/202 (58%), Positives = 147/202 (72%), Gaps = 1/202 (0%)
 Frame = +1

Query: 1    ELFEYMLRSEEKPDDVTFISVLTACSHVGLIDEGIKYLNSMEK-HGIKPLADHYTCVIDS 177
            ELFEYML +++KPD VTFI+VLT CSH GL+DE I Y NSME  +GI+PL +HYTC+ID+
Sbjct: 606  ELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDA 665

Query: 178  LGRAGRLMEAEALVDRMPFKDDPIIWEVFLSSCAVHGNARLGRKAAEQLFRLDPHNSAPY 357
            LGRAGR  E  A++D+MP+KDD I+WEV L++C VH NA LG  AA+ LFRLDP N +PY
Sbjct: 666  LGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPY 725

Query: 358  VLLSNIYAALGQWNDASAIRALMSDRGIVKDRGYSWIYHKDGVATFLVDDQAVTNCKADS 537
            VLLSNIYA LG+  DASA+RALMS RG+VK RGYSW+ HKDG   F+V D    N    +
Sbjct: 726  VLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGARAFMVADDLGMNVGEPT 785

Query: 538  FSNEVNPDLDAVLHNNGDEIYA 603
              ++ N D   +   + DE  A
Sbjct: 786  MFSD-NEDTSGMTEGHLDETCA 806


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