BLASTX nr result

ID: Dioscorea21_contig00031398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031398
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|1956306...   260   2e-67
ref|XP_003576019.1| PREDICTED: DNA replication complex GINS prot...   259   4e-67
tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea m...   253   3e-65
ref|NP_001174454.1| Os05g0453800 [Oryza sativa Japonica Group] g...   249   3e-64
gb|EAY98271.1| hypothetical protein OsI_20178 [Oryza sativa Indi...   249   3e-64

>ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|195630675|gb|ACG36644.1| DNA
           replication complex GINS protein PSF1 [Zea mays]
           gi|223942169|gb|ACN25168.1| unknown [Zea mays]
           gi|414584737|tpg|DAA35308.1| TPA: DNA replication
           complex GINS protein PSF1 [Zea mays]
          Length = 197

 Score =  260 bits (664), Expect = 2e-67
 Identities = 122/149 (81%), Positives = 140/149 (93%)
 Frame = +2

Query: 2   RKIEDQNLDIQTTRNEDHFGAVIHHLSLARNKRCLMAYMYNRAEIIQSLRWKIGPILPQE 181
           RK+ +QNLDI+TTRNEDH+GA IHHLSL RNKRCLMAYMYNRAE+IQS RWKIGP+LP +
Sbjct: 48  RKMVEQNLDIETTRNEDHYGAAIHHLSLLRNKRCLMAYMYNRAEVIQSFRWKIGPVLPHD 107

Query: 182 IQEKLNYSEEEYFKNHSAAIDSYMSELDLDLTVDMVPPKDPYIQVRVLDDIGEVCLGDME 361
           IQEKL++SE+EYFKNHSAAI SY+SE+D+DLTVDMVPPKDPYIQVRVL+DIGEV LGD  
Sbjct: 108 IQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHS 167

Query: 362 ISLTRHSVHFLRRTDAEQFISQGLMEEFL 448
           +SLT++S+HFLRRTDAEQFISQGLMEEFL
Sbjct: 168 VSLTKNSLHFLRRTDAEQFISQGLMEEFL 196


>ref|XP_003576019.1| PREDICTED: DNA replication complex GINS protein PSF1-like
           [Brachypodium distachyon]
          Length = 197

 Score =  259 bits (662), Expect = 4e-67
 Identities = 123/149 (82%), Positives = 139/149 (93%)
 Frame = +2

Query: 2   RKIEDQNLDIQTTRNEDHFGAVIHHLSLARNKRCLMAYMYNRAEIIQSLRWKIGPILPQE 181
           RK+ DQNLDI+TTRNEDH+GA IHHLSL RNKRCL+AYMYNRAE IQS RWK+GP+LP E
Sbjct: 48  RKMVDQNLDIETTRNEDHYGAAIHHLSLLRNKRCLIAYMYNRAETIQSFRWKLGPVLPHE 107

Query: 182 IQEKLNYSEEEYFKNHSAAIDSYMSELDLDLTVDMVPPKDPYIQVRVLDDIGEVCLGDME 361
           IQEKL++SE+EYFKNHSAAI SY+SE+D+DLTVDMVPPKDPYIQVRVL+DIGEV LGD  
Sbjct: 108 IQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHS 167

Query: 362 ISLTRHSVHFLRRTDAEQFISQGLMEEFL 448
           ISLT++S+HFLRRTDAEQFISQGLMEEFL
Sbjct: 168 ISLTKNSLHFLRRTDAEQFISQGLMEEFL 196


>tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea mays]
          Length = 204

 Score =  253 bits (646), Expect = 3e-65
 Identities = 122/156 (78%), Positives = 140/156 (89%), Gaps = 7/156 (4%)
 Frame = +2

Query: 2   RKIEDQNLDIQTTRNEDHFGAVIHHLSLARNKRCLMAYMY-------NRAEIIQSLRWKI 160
           RK+ +QNLDI+TTRNEDH+GA IHHLSL RNKRCLMAYMY       NRAE+IQS RWKI
Sbjct: 48  RKMVEQNLDIETTRNEDHYGAAIHHLSLLRNKRCLMAYMYKTKSSQYNRAEVIQSFRWKI 107

Query: 161 GPILPQEIQEKLNYSEEEYFKNHSAAIDSYMSELDLDLTVDMVPPKDPYIQVRVLDDIGE 340
           GP+LP +IQEKL++SE+EYFKNHSAAI SY+SE+D+DLTVDMVPPKDPYIQVRVL+DIGE
Sbjct: 108 GPVLPHDIQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGE 167

Query: 341 VCLGDMEISLTRHSVHFLRRTDAEQFISQGLMEEFL 448
           V LGD  +SLT++S+HFLRRTDAEQFISQGLMEEFL
Sbjct: 168 VSLGDHSVSLTKNSLHFLRRTDAEQFISQGLMEEFL 203


>ref|NP_001174454.1| Os05g0453800 [Oryza sativa Japonica Group]
           gi|255676414|dbj|BAH93182.1| Os05g0453800 [Oryza sativa
           Japonica Group]
          Length = 263

 Score =  249 bits (637), Expect = 3e-64
 Identities = 117/146 (80%), Positives = 134/146 (91%)
 Frame = +2

Query: 2   RKIEDQNLDIQTTRNEDHFGAVIHHLSLARNKRCLMAYMYNRAEIIQSLRWKIGPILPQE 181
           RK+ +QNLDI+TTRN+DH+GA +HHLSL RNKRCLMAYMYNRAE+IQS RWKIGP+LP E
Sbjct: 86  RKMVEQNLDIETTRNDDHYGAAVHHLSLLRNKRCLMAYMYNRAEVIQSFRWKIGPVLPHE 145

Query: 182 IQEKLNYSEEEYFKNHSAAIDSYMSELDLDLTVDMVPPKDPYIQVRVLDDIGEVCLGDME 361
           IQEKL++SE+EYFKNHSAAI SYMSE+D+DLTVDMVPPKDPYIQVRVL+DIGEV LGD  
Sbjct: 146 IQEKLHFSEKEYFKNHSAAIKSYMSEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHS 205

Query: 362 ISLTRHSVHFLRRTDAEQFISQGLME 439
           ISLT++S+HFLRRTD EQFISQ L E
Sbjct: 206 ISLTKNSLHFLRRTDTEQFISQSLCE 231


>gb|EAY98271.1| hypothetical protein OsI_20178 [Oryza sativa Indica Group]
           gi|222631809|gb|EEE63941.1| hypothetical protein
           OsJ_18766 [Oryza sativa Japonica Group]
          Length = 225

 Score =  249 bits (637), Expect = 3e-64
 Identities = 117/146 (80%), Positives = 134/146 (91%)
 Frame = +2

Query: 2   RKIEDQNLDIQTTRNEDHFGAVIHHLSLARNKRCLMAYMYNRAEIIQSLRWKIGPILPQE 181
           RK+ +QNLDI+TTRN+DH+GA +HHLSL RNKRCLMAYMYNRAE+IQS RWKIGP+LP E
Sbjct: 48  RKMVEQNLDIETTRNDDHYGAAVHHLSLLRNKRCLMAYMYNRAEVIQSFRWKIGPVLPHE 107

Query: 182 IQEKLNYSEEEYFKNHSAAIDSYMSELDLDLTVDMVPPKDPYIQVRVLDDIGEVCLGDME 361
           IQEKL++SE+EYFKNHSAAI SYMSE+D+DLTVDMVPPKDPYIQVRVL+DIGEV LGD  
Sbjct: 108 IQEKLHFSEKEYFKNHSAAIKSYMSEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHS 167

Query: 362 ISLTRHSVHFLRRTDAEQFISQGLME 439
           ISLT++S+HFLRRTD EQFISQ L E
Sbjct: 168 ISLTKNSLHFLRRTDTEQFISQSLCE 193


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