BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031373
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi...   171   4e-41
ref|XP_003591206.1| Pentatricopeptide repeat-containing protein ...   160   1e-37
ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
ref|XP_002892489.1| pentatricopeptide repeat-containing protein ...   145   4e-33
ref|XP_002512497.1| pentatricopeptide repeat-containing protein,...   143   1e-32

>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
           [Vitis vinifera]
          Length = 485

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/166 (46%), Positives = 111/166 (66%)
 Frame = +3

Query: 3   GQAIHATTIISGFHSYPSISIATLDLYSSCHHLHDARNVFDEMPHRDAVVWNILINAFSK 182
           G+ +H   I+ GF  + SI I  +DLY+SC  + DA+ VFDEM  RD +VWN++I  F K
Sbjct: 126 GKGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCK 185

Query: 183 AGDLQNAYLFFRRADHRNTVTWNSIINGFAKAGKDEAAMDLFKEMWAAGIQLDDATLATV 362
            GD++  +  FR+   R+ V+WNS+I G  ++G+D  A++LF+EMW  G + DDAT+ T+
Sbjct: 186 VGDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTI 245

Query: 363 LPVCARLGAVHAGRLIHDHARRRGLLKDAVNNVHVLNSLIEMYCKC 500
           LPVCARLGAV  G  IH +A    LL+D ++   V NSL++ YCKC
Sbjct: 246 LPVCARLGAVDVGEWIHSYAESSRLLRDFIS---VGNSLVDFYCKC 288



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/85 (40%), Positives = 48/85 (56%)
 Frame = +3

Query: 150 VWNILINAFSKAGDLQNAYLFFRRADHRNTVTWNSIINGFAKAGKDEAAMDLFKEMWAAG 329
           V N L++ + K G L+ A+  F     +N V+WN++I+G    GK E   DLF+EM   G
Sbjct: 277 VGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKG 336

Query: 330 IQLDDATLATVLPVCARLGAVHAGR 404
           ++ +DAT   VL  CA  G V  GR
Sbjct: 337 VRPNDATFVGVLSCCAHAGLVERGR 361


>ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480254|gb|AES61457.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 490

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/166 (47%), Positives = 106/166 (63%)
 Frame = +3

Query: 3   GQAIHATTIISGFHSYPSISIATLDLYSSCHHLHDARNVFDEMPHRDAVVWNILINAFSK 182
           GQ +HA     GF+ +  + I  L++YS+C  + DA  VFDEM HR+ VVWNI+IN F K
Sbjct: 127 GQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCK 186

Query: 183 AGDLQNAYLFFRRADHRNTVTWNSIINGFAKAGKDEAAMDLFKEMWAAGIQLDDATLATV 362
            GDL+     F+R   R+ V+WN +I+  A+  KD  A  +F+EM   G + DDATL TV
Sbjct: 187 MGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTV 246

Query: 363 LPVCARLGAVHAGRLIHDHARRRGLLKDAVNNVHVLNSLIEMYCKC 500
           LPVCARLG V AG  IH +A  +GLL+  ++   V NSL++ YCKC
Sbjct: 247 LPVCARLGDVDAGEWIHSYADGKGLLRKVIS---VGNSLVDFYCKC 289



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/89 (37%), Positives = 50/89 (56%)
 Frame = +3

Query: 150 VWNILINAFSKAGDLQNAYLFFRRADHRNTVTWNSIINGFAKAGKDEAAMDLFKEMWAAG 329
           V N L++ + K G+L+ A+  F     +N V+WN++I+G    GK E  ++LF++M   G
Sbjct: 278 VGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKG 337

Query: 330 IQLDDATLATVLPVCARLGAVHAGRLIHD 416
           +   D+T   VL  CA  G V  GR I D
Sbjct: 338 VTPSDSTFVGVLACCAHAGFVDKGREIFD 366


>ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Glycine max]
          Length = 483

 Score =  157 bits (396), Expect = 1e-36
 Identities = 76/166 (45%), Positives = 104/166 (62%)
 Frame = +3

Query: 3   GQAIHATTIISGFHSYPSISIATLDLYSSCHHLHDARNVFDEMPHRDAVVWNILINAFSK 182
           G  +HA  +  GF  + S+ +A L++Y+SC  + DA  VFDEM   D VVWN++I  F K
Sbjct: 125 GGCVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDVVVWNLMIRGFCK 184

Query: 183 AGDLQNAYLFFRRADHRNTVTWNSIINGFAKAGKDEAAMDLFKEMWAAGIQLDDATLATV 362
            GDL+     F +   R  V+WN +++  AK  K+E A++LF EM   G + DDA+L TV
Sbjct: 185 MGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTV 244

Query: 363 LPVCARLGAVHAGRLIHDHARRRGLLKDAVNNVHVLNSLIEMYCKC 500
           LPVCARLGAV  G  IH +A  +G L+D +N   V NSL++ YCKC
Sbjct: 245 LPVCARLGAVDIGEWIHSYANSKGFLQDTIN---VGNSLVDFYCKC 287



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/85 (38%), Positives = 51/85 (60%)
 Frame = +3

Query: 150 VWNILINAFSKAGDLQNAYLFFRRADHRNTVTWNSIINGFAKAGKDEAAMDLFKEMWAAG 329
           V N L++ + K G+LQ A+  F     +N V+WN++I+G A  G+ E  ++LF+EM   G
Sbjct: 276 VGNSLVDFYCKCGNLQAAWSIFNDMASKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGG 335

Query: 330 IQLDDATLATVLPVCARLGAVHAGR 404
            + +D+T   VL  CA +G V  GR
Sbjct: 336 FEPNDSTFVGVLACCAHVGLVDRGR 360


>ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297338331|gb|EFH68748.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1014

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/165 (40%), Positives = 103/165 (62%)
 Frame = +3

Query: 3    GQAIHATTIISGFHSYPSISIATLDLYSSCHHLHDARNVFDEMPHRDAVVWNILINAFSK 182
            G+ +H   I +GFH    + I  ++LY+S   + DA+ VFDEMP R+ VVWN+++  F  
Sbjct: 643  GKCVHGEVIRTGFHRLGKVRIGVVELYTSGGRMGDAQKVFDEMPERNVVVWNLMVRGFCD 702

Query: 183  AGDLQNAYLFFRRADHRNTVTWNSIINGFAKAGKDEAAMDLFKEMWAAGIQLDDATLATV 362
            +GD+Q    FF++   R+ V+WNS+I+  +K G+D  A++LF EM   G   D+AT+ T+
Sbjct: 703  SGDVQRGLSFFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTM 762

Query: 363  LPVCARLGAVHAGRLIHDHARRRGLLKDAVNNVHVLNSLIEMYCK 497
            LP+ A LG +  G+ IH  A   GL+KD +    V N+L++ YCK
Sbjct: 763  LPISASLGVLDTGKWIHSTAESNGLIKDFIT---VGNALVDFYCK 804



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +3

Query: 54   SISIATLDLYSSCHHLHDARNVFDEMPHRDAVVWNILINAFSKAGDLQNAYLFFRRADHR 233
            S S+  LD     H   ++  +  +       V N L++ + K+GDL+ A   FR+   R
Sbjct: 766  SASLGVLDTGKWIHSTAESNGLIKDF----ITVGNALVDFYCKSGDLEAATAIFRKMQRR 821

Query: 234  NTVTWNSIINGFAKAGKDEAAMDLFKEMWAAG-IQLDDATLATVLPVCARLGAVHAG 401
            N V+WN++I+G A  GK E+ +DLF  M   G +  ++AT   VL  C+  G V  G
Sbjct: 822  NVVSWNTMISGSAVNGKGESGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERG 878


>ref|XP_002512497.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548458|gb|EEF49949.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 459

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/166 (42%), Positives = 104/166 (62%)
 Frame = +3

Query: 3   GQAIHATTIISGFHSYPSISIATLDLYSSCHHLHDARNVFDEMPHRDAVVWNILINAFSK 182
           GQ IH   I+ GF  + SI I  ++LY++C  L D++ VFDEM  RD++VWN++I  + +
Sbjct: 284 GQCIHKDVIMIGFECFCSIQIGVVELYANCGLLEDSKKVFDEMRERDSIVWNLMIRGYCR 343

Query: 183 AGDLQNAYLFFRRADHRNTVTWNSIINGFAKAGKDEAAMDLFKEMWAAGIQLDDATLATV 362
            GD+      FR+   R+ V+WN +I+  A++G+D  A+ LF EM   G + D+AT+ TV
Sbjct: 344 RGDVNMGLYLFRKMSERSVVSWNIMISCLAQSGRDSEALRLFHEMQDEGFKPDEATVVTV 403

Query: 363 LPVCARLGAVHAGRLIHDHARRRGLLKDAVNNVHVLNSLIEMYCKC 500
           LP+CARL AV  G+ I  +A   GL  D V+   V N+L++ Y KC
Sbjct: 404 LPICARLEAVSVGQWIQSYAESTGLYGDFVS---VGNALVDFYSKC 446