BLASTX nr result

ID: Dioscorea21_contig00031363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031363
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]    163   2e-38
ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   158   4e-37
ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37

>dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score =  163 bits (412), Expect = 2e-38
 Identities = 75/90 (83%), Positives = 81/90 (90%)
 Frame = -1

Query: 383 PRTTNVLADIEEEEKENALNYHSERLAIAFALMNTSPGMPIRIVKNLRVCADCHLVTKLI 204
           PRT+NVLADIEEEEKE ALNYHSERLAIAFAL+ + PG PIRIVKNLR+C DCHLV KLI
Sbjct: 507 PRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCGDCHLVIKLI 566

Query: 203 SKIYDREITVRDRSRFHHFRDGSCSCKDYW 114
           SK+YDREI VRDRSRFHHF+ G CSCKDYW
Sbjct: 567 SKVYDREIIVRDRSRFHHFKGGECSCKDYW 596


>ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Brachypodium distachyon]
          Length = 598

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/90 (80%), Positives = 81/90 (90%)
 Frame = -1

Query: 383 PRTTNVLADIEEEEKENALNYHSERLAIAFALMNTSPGMPIRIVKNLRVCADCHLVTKLI 204
           P T+NVLADIE+EEKE+ALNYHSERLAIAFAL+ + PG PIRIVKNLRVC DCH+  KLI
Sbjct: 509 PHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRVCGDCHMAIKLI 568

Query: 203 SKIYDREITVRDRSRFHHFRDGSCSCKDYW 114
           SK+YDREI VRDRSRFHHF+ G+CSCKDYW
Sbjct: 569 SKVYDREIIVRDRSRFHHFKGGACSCKDYW 598


>ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  159 bits (403), Expect = 2e-37
 Identities = 71/90 (78%), Positives = 80/90 (88%)
 Frame = -1

Query: 383 PRTTNVLADIEEEEKENALNYHSERLAIAFALMNTSPGMPIRIVKNLRVCADCHLVTKLI 204
           P T NVLADIEEEEKE AL+YHSE++AIAF L+NT PG PIR++KNLRVCADCH+  KLI
Sbjct: 502 PHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLI 561

Query: 203 SKIYDREITVRDRSRFHHFRDGSCSCKDYW 114
           +KIYDREI +RDRSRFHHFR GSCSCKDYW
Sbjct: 562 AKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591


>ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  158 bits (400), Expect = 4e-37
 Identities = 71/90 (78%), Positives = 82/90 (91%)
 Frame = -1

Query: 383 PRTTNVLADIEEEEKENALNYHSERLAIAFALMNTSPGMPIRIVKNLRVCADCHLVTKLI 204
           PRT NVLADIEEEEKE AL++H+E++AIAF L+NT PG PIRI+KNLRVCADCHL  KLI
Sbjct: 520 PRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLI 579

Query: 203 SKIYDREITVRDRSRFHHFRDGSCSCKDYW 114
           SK+++REI VRDRSRFHHF+DGSCSCKDYW
Sbjct: 580 SKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609


>ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  158 bits (400), Expect = 4e-37
 Identities = 71/90 (78%), Positives = 82/90 (91%)
 Frame = -1

Query: 383 PRTTNVLADIEEEEKENALNYHSERLAIAFALMNTSPGMPIRIVKNLRVCADCHLVTKLI 204
           PRT NVLADIEEEEKE AL++H+E++AIAF L+NT PG PIRI+KNLRVCADCHL  KLI
Sbjct: 520 PRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLI 579

Query: 203 SKIYDREITVRDRSRFHHFRDGSCSCKDYW 114
           SK+++REI VRDRSRFHHF+DGSCSCKDYW
Sbjct: 580 SKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609


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