BLASTX nr result

ID: Dioscorea21_contig00031342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031342
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...    71   1e-10
emb|CBI40063.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...    70   1e-10
ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_003581370.1| PREDICTED: uncharacterized protein LOC100843...    66   3e-09

>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
           gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
           protein, putative [Ricinus communis]
          Length = 781

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/98 (38%), Positives = 58/98 (59%)
 Frame = -1

Query: 348 LNMMDGDLDSCGGYSNEQEDDGCSETTRVVARFLHHKFASHREGEQKKTLNLSSFLQGST 169
           LNMM+ ++ S  G  + Q   G S  TRV  R LH  F   +   +++ +NL S L+G  
Sbjct: 665 LNMMNEEISSDEG--DNQNQYGWSGRTRVAVRCLHRSFLKQKNRREEEVVNLLSLLEGRA 722

Query: 168 RTKSAKVFYEILALRSFGCIDVTQDSPYSDIILSATSQ 55
           + +SA++FYEIL L+S G + V Q++ Y DI++   SQ
Sbjct: 723 KKESARLFYEILVLKSKGYVHVKQENAYGDILVWKASQ 760


>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/103 (35%), Positives = 65/103 (63%)
 Frame = -1

Query: 342 MMDGDLDSCGGYSNEQEDDGCSETTRVVARFLHHKFASHREGEQKKTLNLSSFLQGSTRT 163
           +M+ +++SC   +  Q+ +G S+ T +VAR+L   F + ++   +  + LS FL G T+ 
Sbjct: 516 LMNEEINSCEVAN--QKINGWSDRTGMVARYLCRSFLNQKKQGDENAVTLSQFLTGKTKK 573

Query: 162 KSAKVFYEILALRSFGCIDVTQDSPYSDIILSATSQLEKILEK 34
           +S+++FYEIL L+S G +DV Q++ Y DI +  T Q+E +  K
Sbjct: 574 ESSRLFYEILVLKSKGYVDVEQNNAYGDIRVMKTLQMESVSGK 616


>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
           vinifera]
          Length = 756

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/103 (35%), Positives = 65/103 (63%)
 Frame = -1

Query: 342 MMDGDLDSCGGYSNEQEDDGCSETTRVVARFLHHKFASHREGEQKKTLNLSSFLQGSTRT 163
           +M+ +++SC   +  Q+ +G S+ T +VAR+L   F + ++   +  + LS FL G T+ 
Sbjct: 651 LMNEEINSCEVAN--QKINGWSDRTGMVARYLCRSFLNQKKQGDENAVTLSQFLTGKTKK 708

Query: 162 KSAKVFYEILALRSFGCIDVTQDSPYSDIILSATSQLEKILEK 34
           +S+++FYEIL L+S G +DV Q++ Y DI +  T Q+E +  K
Sbjct: 709 ESSRLFYEILVLKSKGYVDVEQNNAYGDIRVMKTLQMESVSGK 751


>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/81 (41%), Positives = 53/81 (65%)
 Frame = -1

Query: 288 DGCSETTRVVARFLHHKFASHREGEQKKTLNLSSFLQGSTRTKSAKVFYEILALRSFGCI 109
           DG SE TRV  + LH  F   ++  Q++ LNL   L+G T+ +SA++FYEIL L+S G +
Sbjct: 686 DGWSERTRVAVKCLHASFLIQKKRRQEEVLNLLRILEGRTKRESARLFYEILVLKSKGYV 745

Query: 108 DVTQDSPYSDIILSATSQLEK 46
           DV +++ Y DI++  T Q ++
Sbjct: 746 DVKEENLYGDILIWKTPQWDQ 766


>ref|XP_003581370.1| PREDICTED: uncharacterized protein LOC100843631 [Brachypodium
           distachyon]
          Length = 741

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = -1

Query: 279 SETTRVVARFLHHKFASHREGEQKKT-LNLSSFLQGSTRTKSAKVFYEILALRSFGCIDV 103
           S  TR VAR LH  F   +  +Q  + + LS  L+G  R  +A+ FYE L L+S G I+V
Sbjct: 657 STRTRTVARCLHQVFLDKKCQQQGNSPVTLSQALEGRKRKTTARFFYETLNLKSRGLIEV 716

Query: 102 TQDSPYSDIILSATSQLEKILE 37
            QDSPY  I++SAT QLE + +
Sbjct: 717 NQDSPYESIVISATPQLELLFQ 738


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