BLASTX nr result

ID: Dioscorea21_contig00031322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031322
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group]     123   2e-26
emb|CAH66352.1| OSIGBa0135C09.3 [Oryza sativa Indica Group]           122   3e-26
dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica G...   121   7e-26
ref|NP_001061718.1| Os08g0389500 [Oryza sativa Japonica Group] g...   121   7e-26
gb|AAL77140.1|AC097447_6 Putative pol polyprotein [Oryza sativa ...   121   7e-26

>gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1094

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/74 (77%), Positives = 65/74 (87%)
 Frame = +1

Query: 1   RQHTAPYSPQQNGVVERRNGTVVAATRSMLKAKGLPGWFWGEAVSTAVYVLNRCPTKSVD 180
           RQ TAPYSPQQNGVVERRN TVVAA RSMLKA G+P  FWGEAV  AVY+LNR PTKS+D
Sbjct: 329 RQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAGMPAQFWGEAVVAAVYLLNRSPTKSLD 388

Query: 181 GMTPFEAWHGKKPA 222
           G+TP+EAWHG++P+
Sbjct: 389 GVTPYEAWHGRRPS 402


>emb|CAH66352.1| OSIGBa0135C09.3 [Oryza sativa Indica Group]
          Length = 1366

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/74 (74%), Positives = 66/74 (89%)
 Frame = +1

Query: 1   RQHTAPYSPQQNGVVERRNGTVVAATRSMLKAKGLPGWFWGEAVSTAVYVLNRCPTKSVD 180
           RQ TAPYSPQQNGVVERRN T+VA  RSM+KAKG+PG FWGEA+STAV++LNR PTKS+D
Sbjct: 610 RQLTAPYSPQQNGVVERRNQTIVATARSMMKAKGVPGRFWGEAMSTAVFLLNRSPTKSLD 669

Query: 181 GMTPFEAWHGKKPA 222
             TP+EAW+G++PA
Sbjct: 670 NQTPYEAWYGQRPA 683


>dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1094

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/74 (75%), Positives = 64/74 (86%)
 Frame = +1

Query: 1   RQHTAPYSPQQNGVVERRNGTVVAATRSMLKAKGLPGWFWGEAVSTAVYVLNRCPTKSVD 180
           RQ TAPYSPQQNGVVERRN TVVAA RSMLKA G+P  FWGEAV  AVY+ NR PTKS+D
Sbjct: 329 RQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAGMPAQFWGEAVMAAVYLWNRSPTKSLD 388

Query: 181 GMTPFEAWHGKKPA 222
           G+TP+EAWHG++P+
Sbjct: 389 GVTPYEAWHGRRPS 402


>ref|NP_001061718.1| Os08g0389500 [Oryza sativa Japonica Group]
           gi|113623687|dbj|BAF23632.1| Os08g0389500 [Oryza sativa
           Japonica Group]
          Length = 1453

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/73 (73%), Positives = 61/73 (83%)
 Frame = +1

Query: 1   RQHTAPYSPQQNGVVERRNGTVVAATRSMLKAKGLPGWFWGEAVSTAVYVLNRCPTKSVD 180
           R  TAPY+PQQNGVVERRN TV+   RSM+KAK LPGWFWGEAV+TAV++LNR PT+ VD
Sbjct: 671 RHLTAPYTPQQNGVVERRNQTVMGMARSMMKAKSLPGWFWGEAVNTAVFLLNRAPTQCVD 730

Query: 181 GMTPFEAWHGKKP 219
           G TPFE WHG KP
Sbjct: 731 GKTPFEVWHGVKP 743


>gb|AAL77140.1|AC097447_6 Putative pol polyprotein [Oryza sativa Japonica Group]
           gi|31430314|gb|AAP52245.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1283

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/74 (74%), Positives = 65/74 (87%)
 Frame = +1

Query: 1   RQHTAPYSPQQNGVVERRNGTVVAATRSMLKAKGLPGWFWGEAVSTAVYVLNRCPTKSVD 180
           RQ TAPYSPQQNGVVE RN T+VA  RSMLKAKG+PG FWGEA+STAV++LNR PTKS+D
Sbjct: 676 RQLTAPYSPQQNGVVEHRNQTIVATARSMLKAKGVPGRFWGEAMSTAVFLLNRSPTKSLD 735

Query: 181 GMTPFEAWHGKKPA 222
             TP+EAW+G++PA
Sbjct: 736 NQTPYEAWYGQRPA 749


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