BLASTX nr result

ID: Dioscorea21_contig00031301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031301
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_004148693.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   110   2e-22
ref|NP_001152181.1| mini zinc finger 3 [Zea mays] gi|195653613|g...   109   2e-22
ref|XP_002283546.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   107   8e-22
ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22

>ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|222866857|gb|EEF03988.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/89 (59%), Positives = 62/89 (69%)
 Frame = -1

Query: 328 RHLVLRRCEKASXXXXXXXXXXXXXRSVRYGECQKNHAASIGGHAVDGCREFMADGEEGT 149
           R +V+RR E+ S              +V+YGECQKNHAA +GG+AVDGCREFMA GEEGT
Sbjct: 4   RQVVVRRSEEPSRSSTTSSFTIR---NVKYGECQKNHAAGVGGYAVDGCREFMASGEEGT 60

Query: 148 TNALKCAACGCHRSFHRRVPEYGGSCDCS 62
             AL CAACGCHR+FHRR  E   +CDCS
Sbjct: 61  AAALTCAACGCHRNFHRREVETEVACDCS 89


>ref|XP_004148693.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Cucumis sativus]
          Length = 92

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/89 (60%), Positives = 61/89 (68%)
 Frame = -1

Query: 328 RHLVLRRCEKASXXXXXXXXXXXXXRSVRYGECQKNHAASIGGHAVDGCREFMADGEEGT 149
           R +VLRR E++S              SVRYGECQKNHAA +GG+AVDGCREFMA G+EGT
Sbjct: 4   RQVVLRRSEESSRDSVASSFTVR---SVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60

Query: 148 TNALKCAACGCHRSFHRRVPEYGGSCDCS 62
           T  L CAACGCHR+FHRR       CDCS
Sbjct: 61  TAGLTCAACGCHRNFHRRQVGTEVVCDCS 89


>ref|NP_001152181.1| mini zinc finger 3 [Zea mays] gi|195653613|gb|ACG46274.1| mini zinc
           finger 3 [Zea mays] gi|414885424|tpg|DAA61438.1| TPA:
           mini zinc finger 3 [Zea mays]
          Length = 89

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/82 (63%), Positives = 60/82 (73%)
 Frame = -1

Query: 328 RHLVLRRCEKASXXXXXXXXXXXXXRSVRYGECQKNHAASIGGHAVDGCREFMADGEEGT 149
           R L+L+RCE                 SVRYG+C++NHAAS GGHAVDGCREF+A+GEEGT
Sbjct: 3   RLLILQRCEPI---------VRFSCCSVRYGDCRRNHAASTGGHAVDGCREFIAEGEEGT 53

Query: 148 TNALKCAACGCHRSFHRRVPEY 83
           + ALKCAACGCHRSFHRRV  Y
Sbjct: 54  SGALKCAACGCHRSFHRRVQVY 75


>ref|XP_002283546.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 95

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/63 (76%), Positives = 52/63 (82%)
 Frame = -1

Query: 250 SVRYGECQKNHAASIGGHAVDGCREFMADGEEGTTNALKCAACGCHRSFHRRVPEYGGSC 71
           SVRYGECQKNHAA IGGHAVDGCREFMA G+EGT++ L CAACGCHR+FHRR  E    C
Sbjct: 26  SVRYGECQKNHAAGIGGHAVDGCREFMASGQEGTSSELICAACGCHRNFHRREVETEVLC 85

Query: 70  DCS 62
            CS
Sbjct: 86  PCS 88


>ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|222849012|gb|EEE86559.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/63 (74%), Positives = 53/63 (84%)
 Frame = -1

Query: 250 SVRYGECQKNHAASIGGHAVDGCREFMADGEEGTTNALKCAACGCHRSFHRRVPEYGGSC 71
           +V+YGEC KNHAAS+GG+AVDGCREFMA GEEGT +AL CAACGCHR+FHRR  E    C
Sbjct: 61  NVKYGECLKNHAASVGGYAVDGCREFMASGEEGTADALTCAACGCHRNFHRREVETEVIC 120

Query: 70  DCS 62
           DCS
Sbjct: 121 DCS 123


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