BLASTX nr result

ID: Dioscorea21_contig00031288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031288
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299323.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002514886.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_002299323.1| predicted protein [Populus trichocarpa] gi|222846581|gb|EEE84128.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/76 (38%), Positives = 46/76 (60%)
 Frame = -3

Query: 230 KAIKQDSRENSSRDGGDHSGIISVDHTLTDSKRACKRRAIPCFKCDSSSPSLVVDGNDPN 51
           K  K +++++++  G ++ G + +D  +T   R   +R+I  FK  S+ P  +  G D N
Sbjct: 307 KPPKTENKKSNNNGGNNNGGQMLLDEDITIVPRTLSKRSIRRFKSQSNPPHFMFTGCDSN 366

Query: 50  GTREYWIKTDADSLVL 3
           G+RE WIKTDAD LVL
Sbjct: 367 GSRECWIKTDADYLVL 382


>ref|XP_002514886.1| conserved hypothetical protein [Ricinus communis]
           gi|223545937|gb|EEF47440.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 388

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -3

Query: 230 KAIKQDSRENSSRDGGDHSGIISVDHTLTD-SKRACKRRAIPCFKCDSSSPSLVVDGNDP 54
           K  K D+++N++  G ++ G +  D  +T   +RA  +R+I  +K  S+ P   +  ++ 
Sbjct: 310 KPQKNDNKKNANNAGHNNGGQMLPDEEITVLPQRALSKRSIRRYKSQSNPPQFTLSSSES 369

Query: 53  NGTREYWIKTDADSLVL 3
           NG+RE WIKTDAD LVL
Sbjct: 370 NGSRECWIKTDADYLVL 386


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