BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031278
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516403.1| pentatricopeptide repeat-containing protein,...    77   2e-12
ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
ref|NP_193155.4| pentatricopeptide repeat-containing protein [Ar...    66   3e-09
ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08

>ref|XP_002516403.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544501|gb|EEF46020.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 32/68 (47%), Positives = 44/68 (64%)
 Frame = +1

Query: 199 QHQSLLVEAYHHTNSLKTLLAELSMKNSCPIRLLERDGDWLRDQLWVAVRFLIEEGRPVD 378
           +H +LLVE+YH    LK LLA L+ K SCP+++L+ D DW +D  W  +RFL    R  +
Sbjct: 56  KHNTLLVESYHEHQRLKALLARLNKKGSCPLQMLQDDADWSKDHFWAVIRFLRHSSRSDE 115

Query: 379 ALKVFDAW 402
            L+VFD W
Sbjct: 116 ILQVFDMW 123


>ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Glycine max]
          Length = 509

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = +1

Query: 193 ERQHQSLLVEAYHHTNSLKTLLAELSMKNSCPIRLLERDGDWLRDQLWVAVRFLIEEGRP 372
           + +H +LLVE YH  +SL+ LLA+L  ++  P+ +L  DGDW +D  W  VRFL    R 
Sbjct: 58  DTKHTTLLVETYHLHDSLRALLAKLQKEDCNPLHVLAEDGDWSKDHFWAVVRFLKSASRF 117

Query: 373 VDALKVFDAW 402
              L+VFD W
Sbjct: 118 TQILQVFDMW 127


>ref|NP_193155.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635638|sp|O23278.2|PP310_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14190, chloroplastic; Flags: Precursor
           gi|332657991|gb|AEE83391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 501

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/99 (39%), Positives = 52/99 (52%)
 Frame = +1

Query: 106 TTLAMPRVHSNLSLSKNLAAGGIEDCDEQERQHQSLLVEAYHHTNSLKTLLAELSMKNSC 285
           T+ ++PR  S+L  S  L+  G         Q  SLL    HH   L +L   LS+  SC
Sbjct: 34  TSYSIPRP-SSLRRSLPLSING------DATQPTSLL----HHHRFLSSLTRRLSLSGSC 82

Query: 286 PIRLLERDGDWLRDQLWVAVRFLIEEGRPVDALKVFDAW 402
           P+RLL+ DGDW +D  W  +RFL +  R  + L VFD W
Sbjct: 83  PLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEILPVFDTW 121


>ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Glycine max]
          Length = 506

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/70 (42%), Positives = 41/70 (58%)
 Frame = +1

Query: 193 ERQHQSLLVEAYHHTNSLKTLLAELSMKNSCPIRLLERDGDWLRDQLWVAVRFLIEEGRP 372
           + +H +LLVE YH  +SL+ LLA+L  + S P+ +L  D DW +D  W  VRFL      
Sbjct: 56  DTKHTTLLVETYHLHHSLRALLAKLENEYSNPLHMLAEDADWSKDHFWAVVRFLKSSSNF 115

Query: 373 VDALKVFDAW 402
              L+VFD W
Sbjct: 116 THILQVFDMW 125


>ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Vitis vinifera]
          Length = 581

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = +1

Query: 199 QHQSLLVEAYHHTNSLKTLLAELSMKNSCPIRLLERDGDWLRDQLWVAVRFLIEEGRPVD 378
           +H +LLVE  H    L  L+ +LS K S P++LL  DGDW +   W  +RFL +  R  +
Sbjct: 88  KHTTLLVETLHENERLGVLIQKLSNKASSPLQLLRDDGDWNKQHFWAVIRFLKDASRSSE 147

Query: 379 ALKVFDAW 402
            L VF  W
Sbjct: 148 ILPVFHLW 155