BLASTX nr result

ID: Dioscorea21_contig00031238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031238
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
emb|CBI19766.3| unnamed protein product [Vitis vinifera]               94   9e-18
dbj|BAK01342.1| predicted protein [Hordeum vulgare subsp. vulgare]     93   3e-17

>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/79 (54%), Positives = 61/79 (77%)
 Frame = -1

Query: 238 AYAISGMVNEGKEFYSRMFEEYELSLTMEHYAAIVHLYGRSGRLREAAEVIEKMPMEPDS 59
           AY I+GMV++G+  +S + EE+++  T++HY A+V LYGRSGRL +A E IE MP+EPD 
Sbjct: 633 AYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDV 692

Query: 58  TVWHALLTAARVHGNIKLA 2
           ++W +LLTA R HGN+ LA
Sbjct: 693 SIWTSLLTACRFHGNLNLA 711


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/79 (54%), Positives = 61/79 (77%)
 Frame = -1

Query: 238 AYAISGMVNEGKEFYSRMFEEYELSLTMEHYAAIVHLYGRSGRLREAAEVIEKMPMEPDS 59
           AY I+GMV++G+  +S + EE+++  T++HY A+V LYGRSGRL +A E IE MP+EPD 
Sbjct: 633 AYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDV 692

Query: 58  TVWHALLTAARVHGNIKLA 2
           ++W +LLTA R HGN+ LA
Sbjct: 693 SIWTSLLTACRFHGNLNLA 711


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/79 (53%), Positives = 63/79 (79%)
 Frame = -1

Query: 238 AYAISGMVNEGKEFYSRMFEEYELSLTMEHYAAIVHLYGRSGRLREAAEVIEKMPMEPDS 59
           A+++SGMV++GK+ +S M E+Y++   +EH++A++ L GRSG+L EA E IE M +EPDS
Sbjct: 638 AFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDS 697

Query: 58  TVWHALLTAARVHGNIKLA 2
            +W ALLTA+++HGNI LA
Sbjct: 698 CIWAALLTASKIHGNIGLA 716


>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/79 (53%), Positives = 63/79 (79%)
 Frame = -1

Query: 238 AYAISGMVNEGKEFYSRMFEEYELSLTMEHYAAIVHLYGRSGRLREAAEVIEKMPMEPDS 59
           A+++SGMV++GK+ +S M E+Y++   +EH++A++ L GRSG+L EA E IE M +EPDS
Sbjct: 292 AFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDS 351

Query: 58  TVWHALLTAARVHGNIKLA 2
            +W ALLTA+++HGNI LA
Sbjct: 352 CIWAALLTASKIHGNIGLA 370


>dbj|BAK01342.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 414

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/79 (50%), Positives = 63/79 (79%)
 Frame = -1

Query: 238 AYAISGMVNEGKEFYSRMFEEYELSLTMEHYAAIVHLYGRSGRLREAAEVIEKMPMEPDS 59
           AY + GMV+EG+E +  M ++Y ++  ++HYAA+V L GRSGRL+EA  +I++MP+ P+ 
Sbjct: 158 AYGMEGMVSEGREVFLNMDKDYNVTPDLDHYAAMVDLLGRSGRLQEAYALIDEMPLTPNL 217

Query: 58  TVWHALLTAARVHGNIKLA 2
           T+W +LLT+AR+HGN++LA
Sbjct: 218 TLWESLLTSARMHGNVRLA 236


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