BLASTX nr result

ID: Dioscorea21_contig00031217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031217
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...    67   2e-09
emb|CBI18267.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...    66   3e-09
ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp....    65   4e-09
ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabi...    65   4e-09

>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/39 (76%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
 Frame = +1

Query: 109 RGFSSY-SVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222
           R FSSY S+EQFSDDEY+C+FENQ+ SS+VANVDEW+WK
Sbjct: 64  RLFSSYYSLEQFSDDEYDCDFENQQASSTVANVDEWKWK 102


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +1

Query: 109 RGFSSYSVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222
           RG   Y+ EQFSDDEY+C+FE+ K SSSVAN+DEW+WK
Sbjct: 40  RGLCGYAAEQFSDDEYDCDFESHKASSSVANIDEWKWK 77


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +1

Query: 109 RGFSSYSVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222
           RG   Y+ EQFSDDEY+C+FE+ K SSSVAN+DEW+WK
Sbjct: 40  RGLCGYAAEQFSDDEYDCDFESHKASSSVANIDEWKWK 77


>ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316958|gb|EFH47380.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1160

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +1

Query: 109 RGFSSYSVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222
           R F  ++ EQFSDDEYECEFE  K SSSVANVDEW+WK
Sbjct: 64  RRFIGHTAEQFSDDEYECEFEEHKASSSVANVDEWKWK 101


>ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
           gi|10178028|dbj|BAB11511.1| ATP-dependent RNA helicase
           A-like protein [Arabidopsis thaliana]
           gi|332003418|gb|AED90801.1| DEA(D/H)-box RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 1161

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +1

Query: 109 RGFSSYSVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222
           R F  ++ EQFSDDEYECEFE  K SSSVANVDEW+WK
Sbjct: 63  RRFIGHTAEQFSDDEYECEFEEHKASSSVANVDEWKWK 100


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