BLASTX nr result
ID: Dioscorea21_contig00031217
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00031217 (224 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica... 67 2e-09 emb|CBI18267.3| unnamed protein product [Vitis vinifera] 66 3e-09 ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica... 66 3e-09 ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp.... 65 4e-09 ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabi... 65 4e-09 >ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine max] Length = 1161 Score = 66.6 bits (161), Expect = 2e-09 Identities = 30/39 (76%), Positives = 36/39 (92%), Gaps = 1/39 (2%) Frame = +1 Query: 109 RGFSSY-SVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222 R FSSY S+EQFSDDEY+C+FENQ+ SS+VANVDEW+WK Sbjct: 64 RLFSSYYSLEQFSDDEYDCDFENQQASSTVANVDEWKWK 102 >emb|CBI18267.3| unnamed protein product [Vitis vinifera] Length = 1162 Score = 66.2 bits (160), Expect = 3e-09 Identities = 26/38 (68%), Positives = 32/38 (84%) Frame = +1 Query: 109 RGFSSYSVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222 RG Y+ EQFSDDEY+C+FE+ K SSSVAN+DEW+WK Sbjct: 40 RGLCGYAAEQFSDDEYDCDFESHKASSSVANIDEWKWK 77 >ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera] Length = 1136 Score = 66.2 bits (160), Expect = 3e-09 Identities = 26/38 (68%), Positives = 32/38 (84%) Frame = +1 Query: 109 RGFSSYSVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222 RG Y+ EQFSDDEY+C+FE+ K SSSVAN+DEW+WK Sbjct: 40 RGLCGYAAEQFSDDEYDCDFESHKASSSVANIDEWKWK 77 >ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316958|gb|EFH47380.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1160 Score = 65.5 bits (158), Expect = 4e-09 Identities = 28/38 (73%), Positives = 31/38 (81%) Frame = +1 Query: 109 RGFSSYSVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222 R F ++ EQFSDDEYECEFE K SSSVANVDEW+WK Sbjct: 64 RRFIGHTAEQFSDDEYECEFEEHKASSSVANVDEWKWK 101 >ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] gi|10178028|dbj|BAB11511.1| ATP-dependent RNA helicase A-like protein [Arabidopsis thaliana] gi|332003418|gb|AED90801.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] Length = 1161 Score = 65.5 bits (158), Expect = 4e-09 Identities = 28/38 (73%), Positives = 31/38 (81%) Frame = +1 Query: 109 RGFSSYSVEQFSDDEYECEFENQKPSSSVANVDEWRWK 222 R F ++ EQFSDDEYECEFE K SSSVANVDEW+WK Sbjct: 63 RRFIGHTAEQFSDDEYECEFEEHKASSSVANVDEWKWK 100