BLASTX nr result

ID: Dioscorea21_contig00031181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031181
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL58207.1|AC090882_10 putative GTP-binding protein [Oryza sa...   252   4e-65
ref|XP_003560840.1| PREDICTED: dynamin-related protein 1C-like [...   250   2e-64
ref|XP_002315854.1| predicted protein [Populus trichocarpa] gi|2...   248   5e-64
gb|ACN34672.1| unknown [Zea mays] gi|413933270|gb|AFW67821.1| dy...   248   7e-64
ref|NP_001151519.1| dynamin-related protein 1C [Zea mays] gi|195...   248   7e-64

>gb|AAL58207.1|AC090882_10 putative GTP-binding protein [Oryza sativa Japonica Group]
           gi|108710736|gb|ABF98531.1| Dynamin-related protein 1C,
           putative, expressed [Oryza sativa Japonica Group]
           gi|215769458|dbj|BAH01687.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193636|gb|EEC76063.1| hypothetical protein
           OsI_13267 [Oryza sativa Indica Group]
           gi|222625676|gb|EEE59808.1| hypothetical protein
           OsJ_12333 [Oryza sativa Japonica Group]
          Length = 611

 Score =  252 bits (644), Expect = 4e-65
 Identities = 123/166 (74%), Positives = 139/166 (83%)
 Frame = +3

Query: 6   TEELKRFPTLQXXXXXXXXXXLERFRDDSRKTVLRLVEMESSYLTVEFFRKLPLEPEKGT 185
           TEELKRFPTLQ          LERFR+D RKTV+RLVEME+SYLTVEFFRKLP EP+KG 
Sbjct: 446 TEELKRFPTLQTDIAAAANESLERFREDGRKTVIRLVEMEASYLTVEFFRKLPTEPDKGA 505

Query: 186 NNPTPTTDRYADGHLRRIGSNVSAYVGMVCETLRLTIPKAIVYCQVREAKRSLLNYFYSQ 365
           NN TP  DRY D HLRRIGSNVS+Y+ MVCETLR TIPKA+V+CQV+EAKR+LLN FY+ 
Sbjct: 506 NNNTPANDRYQDNHLRRIGSNVSSYINMVCETLRNTIPKAVVHCQVKEAKRNLLNRFYAH 565

Query: 366 VGQREKKQLGAMLDEDPTLMDKRNGIAKRLELYKSARDEIDSVAWK 503
           VG +EKKQL AMLDEDP LM+KR+ + KRLELYKSAR+EIDSVAWK
Sbjct: 566 VGSKEKKQLSAMLDEDPALMEKRDSLVKRLELYKSARNEIDSVAWK 611


>ref|XP_003560840.1| PREDICTED: dynamin-related protein 1C-like [Brachypodium
           distachyon]
          Length = 612

 Score =  250 bits (638), Expect = 2e-64
 Identities = 121/166 (72%), Positives = 139/166 (83%)
 Frame = +3

Query: 6   TEELKRFPTLQXXXXXXXXXXLERFRDDSRKTVLRLVEMESSYLTVEFFRKLPLEPEKGT 185
           TEELKRFPTLQ          LERFR+D RKTV+RLV+ME+SYLTVEFFRKLP EP+KG 
Sbjct: 447 TEELKRFPTLQSDIAAAANESLERFREDGRKTVIRLVDMEASYLTVEFFRKLPTEPDKGA 506

Query: 186 NNPTPTTDRYADGHLRRIGSNVSAYVGMVCETLRLTIPKAIVYCQVREAKRSLLNYFYSQ 365
           NN TP  DRY D HLRRIGSNVS+Y+ MVCETLR TIPKA+V+CQVREAKR+LLN FY+ 
Sbjct: 507 NNNTPANDRYQDNHLRRIGSNVSSYINMVCETLRNTIPKAVVHCQVREAKRNLLNRFYAH 566

Query: 366 VGQREKKQLGAMLDEDPTLMDKRNGIAKRLELYKSARDEIDSVAWK 503
           VG +EKKQL AMLDEDP LM+KR+ + K+LELYKSAR+EIDSV+WK
Sbjct: 567 VGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVSWK 612


>ref|XP_002315854.1| predicted protein [Populus trichocarpa] gi|222864894|gb|EEF02025.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score =  248 bits (634), Expect = 5e-64
 Identities = 127/170 (74%), Positives = 140/170 (82%), Gaps = 4/170 (2%)
 Frame = +3

Query: 6   TEELKRFPTLQXXXXXXXXXXLERFRDDSRKTVLRLVEMESSYLTVEFFRKLPLEPEKGT 185
           TEELKRFPTLQ          LERFRD+SR+TV RLV+MESSYLTVEFFRKL LEPEK T
Sbjct: 444 TEELKRFPTLQSDIAAAANEALERFRDESRRTVQRLVDMESSYLTVEFFRKLHLEPEKNT 503

Query: 186 NN----PTPTTDRYADGHLRRIGSNVSAYVGMVCETLRLTIPKAIVYCQVREAKRSLLNY 353
           N     P P  DRY D H RRIGSNVSAY+GMVC+TLR +IPKA+VYCQVREAKR LLN 
Sbjct: 504 NTNPNQPGPNADRYNDNHFRRIGSNVSAYIGMVCDTLRNSIPKAVVYCQVREAKRCLLNN 563

Query: 354 FYSQVGQREKKQLGAMLDEDPTLMDKRNGIAKRLELYKSARDEIDSVAWK 503
           FY+QVG+REK++LGAMLDEDP LM++R  IAKRLELYKSARDEIDSVAWK
Sbjct: 564 FYAQVGRREKERLGAMLDEDPQLMERRTTIAKRLELYKSARDEIDSVAWK 613


>gb|ACN34672.1| unknown [Zea mays] gi|413933270|gb|AFW67821.1| dynamin protein 1C
           [Zea mays]
          Length = 611

 Score =  248 bits (633), Expect = 7e-64
 Identities = 122/166 (73%), Positives = 138/166 (83%)
 Frame = +3

Query: 6   TEELKRFPTLQXXXXXXXXXXLERFRDDSRKTVLRLVEMESSYLTVEFFRKLPLEPEKGT 185
           TEELKRFPTLQ          LERFR+D RKTVLRLVEME+SYLTVEFFRKLP EPEK  
Sbjct: 446 TEELKRFPTLQSDIAAAANESLERFREDGRKTVLRLVEMEASYLTVEFFRKLPTEPEKAA 505

Query: 186 NNPTPTTDRYADGHLRRIGSNVSAYVGMVCETLRLTIPKAIVYCQVREAKRSLLNYFYSQ 365
           +  TP +DRY D HLRRIGSNVS+Y+ MVCETLR TIPKA+V+CQV+EAKR+LLN FY+ 
Sbjct: 506 DKNTPVSDRYQDNHLRRIGSNVSSYINMVCETLRNTIPKAVVHCQVKEAKRNLLNRFYAH 565

Query: 366 VGQREKKQLGAMLDEDPTLMDKRNGIAKRLELYKSARDEIDSVAWK 503
           VG +EKKQL AMLDEDP LM+KR+ + KRLELYKSAR+EIDSVAWK
Sbjct: 566 VGSKEKKQLSAMLDEDPALMEKRDALVKRLELYKSARNEIDSVAWK 611


>ref|NP_001151519.1| dynamin-related protein 1C [Zea mays] gi|195647378|gb|ACG43157.1|
           dynamin-related protein 1C [Zea mays]
          Length = 611

 Score =  248 bits (633), Expect = 7e-64
 Identities = 122/166 (73%), Positives = 138/166 (83%)
 Frame = +3

Query: 6   TEELKRFPTLQXXXXXXXXXXLERFRDDSRKTVLRLVEMESSYLTVEFFRKLPLEPEKGT 185
           TEELKRFPTLQ          LERFR+D RKTVLRLVEME+SYLTVEFFRKLP EPEK  
Sbjct: 446 TEELKRFPTLQSDIAAAANESLERFREDGRKTVLRLVEMEASYLTVEFFRKLPTEPEKAA 505

Query: 186 NNPTPTTDRYADGHLRRIGSNVSAYVGMVCETLRLTIPKAIVYCQVREAKRSLLNYFYSQ 365
           +  TP +DRY D HLRRIGSNVS+Y+ MVCETLR TIPKA+V+CQV+EAKR+LLN FY+ 
Sbjct: 506 DKNTPVSDRYQDNHLRRIGSNVSSYINMVCETLRNTIPKAVVHCQVKEAKRNLLNRFYAH 565

Query: 366 VGQREKKQLGAMLDEDPTLMDKRNGIAKRLELYKSARDEIDSVAWK 503
           VG +EKKQL AMLDEDP LM+KR+ + KRLELYKSAR+EIDSVAWK
Sbjct: 566 VGSKEKKQLSAMLDEDPALMEKRDALVKRLELYKSARNEIDSVAWK 611


Top