BLASTX nr result

ID: Dioscorea21_contig00031126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031126
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452270.1| hypothetical protein SORBIDRAFT_04g022770 [S...    60   1e-07
ref|XP_002488897.1| hypothetical protein SORBIDRAFT_2246s002010 ...    59   3e-07
ref|XP_002452355.1| hypothetical protein SORBIDRAFT_04g024215 [S...    58   7e-07
ref|XP_002441714.1| hypothetical protein SORBIDRAFT_08g001155 [S...    57   1e-06
ref|XP_002443506.1| hypothetical protein SORBIDRAFT_08g020720 [S...    57   2e-06

>ref|XP_002452270.1| hypothetical protein SORBIDRAFT_04g022770 [Sorghum bicolor]
           gi|241932101|gb|EES05246.1| hypothetical protein
           SORBIDRAFT_04g022770 [Sorghum bicolor]
          Length = 713

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
 Frame = -2

Query: 399 DFCSGSNW---FADSFSSLFGEHAGEVMHNLGHVSLAC-PNGWVWGLKSFASKLAPSVYH 232
           D   G+ W    A SF++ F      +   L  V L+  P+ + W      S  A S Y 
Sbjct: 482 DALQGNAWVSHLAGSFTAQFLLEFSHLCDLLEDVQLSDEPDTFSWRFSKDQSYSAASAYG 541

Query: 231 TLNHCPLVFPPWPGWKVIWSLKVMPRVRYFLWLIFYGRLSSADFLFSINLGPRRLCVFCN 52
            +    L   P  G K++W      RVR+F WL  +GR  + D  F   L P  LC+ CN
Sbjct: 542 AMF---LGSSPVLGAKLLWKTVAPHRVRFFFWLCLHGRCWTGDRRFRHGLQPSNLCIMCN 598

Query: 51  LTFETSEHIFNGCCKSQ 1
              ET +HI  GC  S+
Sbjct: 599 QEPETMDHILIGCSFSR 615


>ref|XP_002488897.1| hypothetical protein SORBIDRAFT_2246s002010 [Sorghum bicolor]
           gi|241947269|gb|EES20414.1| hypothetical protein
           SORBIDRAFT_2246s002010 [Sorghum bicolor]
          Length = 340

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
 Frame = -2

Query: 387 GSNW---FADSFSSLFGEHAGEVMHNLGHVSLAC-PNGWVWGLKSFASKLAPSVYHTLNH 220
           G+ W    A SF++ F      +   L  V L+  P+ + W      S  A S Y  +  
Sbjct: 113 GNAWVSHLAGSFTAQFLLEFSHLCDLLEDVQLSDEPDTFSWRFSKDHSYSAASTYGGMF- 171

Query: 219 CPLVFPPWPGWKVIWSLKVMPRVRYFLWLIFYGRLSSADFLFSINLGPRRLCVFCNLTFE 40
             L   P  G K++W      RVR+F WL  +GR  + D  F   L P  LCV CN   E
Sbjct: 172 --LGSSPVLGAKLLWKTAAPHRVRFFFWLCLHGRCWTGDRRFQHGLQPSNLCVMCNQEPE 229

Query: 39  TSEHIFNGCCKSQ 1
           T +HI  GC  S+
Sbjct: 230 TMDHILIGCSFSR 242


>ref|XP_002452355.1| hypothetical protein SORBIDRAFT_04g024215 [Sorghum bicolor]
            gi|241932186|gb|EES05331.1| hypothetical protein
            SORBIDRAFT_04g024215 [Sorghum bicolor]
          Length = 1212

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/98 (32%), Positives = 50/98 (51%)
 Frame = -2

Query: 294  PNGWVWGLKSFASKLAPSVYHTLNHCPLVFPPWPGWKVIWSLKVMPRVRYFLWLIFYGRL 115
            P+ + WGL +     A S Y  +    L      G K +W  +  PRVR+F+WLI +GR 
Sbjct: 1020 PDTFRWGLTADGEYSAASAYGAMF---LGSSATVGAKQLWKTRAPPRVRFFVWLILHGRC 1076

Query: 114  SSADFLFSINLGPRRLCVFCNLTFETSEHIFNGCCKSQ 1
             +A+  F   L    +C+ C+ + ET +H+  GC  S+
Sbjct: 1077 WTAERRFRHGLQNSDVCIICDQSSETMDHLVLGCVFSR 1114


>ref|XP_002441714.1| hypothetical protein SORBIDRAFT_08g001155 [Sorghum bicolor]
           gi|241942407|gb|EES15552.1| hypothetical protein
           SORBIDRAFT_08g001155 [Sorghum bicolor]
          Length = 370

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
 Frame = -2

Query: 318 LGHVSLA-CPNGWVWGLKSFASKLAPSVYHTL---NHCPLVFPPWPGWKVIWSLKVMPRV 151
           L H+ L+  P+ + W L    +  A S Y  +   +  P+      G K IW     PRV
Sbjct: 181 LRHIQLSDTPDTFCWRLPGNGTYSAASAYGAMFFGSSLPI------GAKEIWKTAAPPRV 234

Query: 150 RYFLWLIFYGRLSSADFLFSINLGPRRLCVFCNLTFETSEHIFNGCCKSQ 1
           R+F WL+ + R  +A+  F   L     CV C+   ET +HI  GCC S+
Sbjct: 235 RFFFWLVLHRRCWTAERRFRHGLQSSATCVMCDQLPETIDHILLGCCFSK 284


>ref|XP_002443506.1| hypothetical protein SORBIDRAFT_08g020720 [Sorghum bicolor]
           gi|241944199|gb|EES17344.1| hypothetical protein
           SORBIDRAFT_08g020720 [Sorghum bicolor]
          Length = 294

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = -2

Query: 294 PNGWVWGLKSFASKLAPSVYHTL---NHCPLVFPPWPGWKVIWSLKVMPRVRYFLWLIFY 124
           P+ + WGL       A S Y  +   +  P+      G K +W  +  PRVR+F+WLI +
Sbjct: 102 PDTFRWGLTPDGQYSAASAYGAMFLGSSTPV------GAKQLWKTRAPPRVRFFVWLILH 155

Query: 123 GRLSSADFLFSINLGPRRLCVFCNLTFETSEHIFNGCCKSQ 1
           GR  +A+  F   L     C+ C+ + ET +H+  GC  S+
Sbjct: 156 GRCWTAERRFRHGLQTSDTCIICDQSSETMDHLVLGCVFSK 196


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