BLASTX nr result

ID: Dioscorea21_contig00031112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031112
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543689.1| PREDICTED: F-box/LRR-repeat protein 14-like ...    88   6e-16
ref|XP_002517700.1| F-box/LRR-repeat protein, putative [Ricinus ...    88   8e-16
ref|XP_004135866.1| PREDICTED: F-box/LRR-repeat protein 14-like ...    87   1e-15
ref|XP_002448130.1| hypothetical protein SORBIDRAFT_06g021780 [S...    86   3e-15
ref|XP_002270172.1| PREDICTED: F-box/LRR-repeat protein 14 [Viti...    86   4e-15

>ref|XP_003543689.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
          Length = 565

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 54/118 (45%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
 Frame = -2

Query: 344 SGLHNLENLNLSCTSVDXXXXXXXXXXXXXXXXXLGHLVISDEGLI------GLTHLDLF 183
           SGL NLE +NLS T V+                 L    ++D GL       GLT LDLF
Sbjct: 383 SGLSNLEKINLSFTFVNDSGLSKLCGLSSLKSLNLDARQVTDTGLASLTSLTGLTELDLF 442

Query: 182 GCQIHNDGLDNLKCFMNLQSLEISNGFLNDDGIRSIKDLTSLKLLNLSYNFEITDVTL 9
           G +I + G + LKCF NL+ LEI  G L DDG+++IK+L+SLK LNLS N  +TD TL
Sbjct: 443 GARITDFGTNYLKCFKNLRLLEICGGELTDDGVKNIKELSSLKSLNLSQNCNLTDTTL 500


>ref|XP_002517700.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223543332|gb|EEF44864.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 529

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 56/118 (47%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
 Frame = -2

Query: 344 SGLHNLENLNLSCTSVDXXXXXXXXXXXXXXXXXLGHLVISDEGLI------GLTHLDLF 183
           SGL NLE++NLS T +                  L    I+D GL       GLTHLDLF
Sbjct: 347 SGLTNLESINLSFTMITDGGIRKLSGLSSLKSLNLDARQITDSGLAALTNLTGLTHLDLF 406

Query: 182 GCQIHNDGLDNLKCFMNLQSLEISNGFLNDDGIRSIKDLTSLKLLNLSYNFEITDVTL 9
           G +I + G   L+ F NLQSLEI  G L D GIR+IKDL+SL LLNLS N  +TD +L
Sbjct: 407 GARITDSGTHYLRNFKNLQSLEICGGGLTDAGIRNIKDLSSLSLLNLSQNCNLTDKSL 464


>ref|XP_004135866.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
           gi|449509305|ref|XP_004163550.1| PREDICTED:
           F-box/LRR-repeat protein 14-like [Cucumis sativus]
          Length = 578

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 55/118 (46%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
 Frame = -2

Query: 344 SGLHNLENLNLSCTSVDXXXXXXXXXXXXXXXXXLGHLVISD------EGLIGLTHLDLF 183
           SGL NLE LNLS T V                  L    I+D       GL+GLTHLDLF
Sbjct: 396 SGLFNLEKLNLSFTVVTDIGLKKLSGLSSLKSLNLDTRQITDIGLASLTGLVGLTHLDLF 455

Query: 182 GCQIHNDGLDNLKCFMNLQSLEISNGFLNDDGIRSIKDLTSLKLLNLSYNFEITDVTL 9
           G +I + G + L+ F NLQSLEI  G L D G+++IKDL+SL +LNLS N  +TD +L
Sbjct: 456 GARITDSGTNYLRNFKNLQSLEICGGGLTDAGVKNIKDLSSLMVLNLSQNGNLTDKSL 513


>ref|XP_002448130.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
           gi|241939313|gb|EES12458.1| hypothetical protein
           SORBIDRAFT_06g021780 [Sorghum bicolor]
          Length = 581

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/118 (43%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
 Frame = -2

Query: 344 SGLHNLENLNLSCTSVDXXXXXXXXXXXXXXXXXLGHLVISDEGLI------GLTHLDLF 183
           SGL NL+++NLS T V                  L +  I+D GL       GLTHLDLF
Sbjct: 399 SGLRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQITDTGLASLTNLTGLTHLDLF 458

Query: 182 GCQIHNDGLDNLKCFMNLQSLEISNGFLNDDGIRSIKDLTSLKLLNLSYNFEITDVTL 9
           G +I + G++  + F NLQSLE+  G + D G+++IKDL +L LLNLS N  +TD TL
Sbjct: 459 GARITDSGMNCFRFFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKTL 516


>ref|XP_002270172.1| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
           gi|297743556|emb|CBI36423.3| unnamed protein product
           [Vitis vinifera]
          Length = 578

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/118 (45%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
 Frame = -2

Query: 344 SGLHNLENLNLSCTSVDXXXXXXXXXXXXXXXXXLGHLVISDEGLI------GLTHLDLF 183
           SGL NLE++NLS T+V                  L    I+D GL       GLTHLDLF
Sbjct: 396 SGLANLESINLSFTAVTDSGLRKLSALSSLKSLNLDARQITDAGLAALTSLTGLTHLDLF 455

Query: 182 GCQIHNDGLDNLKCFMNLQSLEISNGFLNDDGIRSIKDLTSLKLLNLSYNFEITDVTL 9
           G +I + G   L+ F NLQSLEI  G L D G+++IKDLT L +LNLS N  +TD +L
Sbjct: 456 GARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQNCNLTDKSL 513


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