BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031072
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525999.1| pentatricopeptide repeat-containing protein,...   187   6e-46
ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
ref|NP_178283.1| pentatricopeptide repeat-containing protein [Ar...   160   1e-37
ref|XP_002876773.1| pentatricopeptide repeat-containing protein ...   156   2e-36
ref|XP_003617308.1| Auxin response factor [Medicago truncatula] ...   122   2e-26

>ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534731|gb|EEF36423.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 557

 Score =  187 bits (476), Expect = 6e-46
 Identities = 90/161 (55%), Positives = 128/161 (79%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEAKEFLSRAKHANEISHTILFDGFCKFGDSNEAEKVF 182
           G +PDAVT+S ++DGLCK+G   +AK +  + K ANE+S+T L DG CK G+ +E E+V 
Sbjct: 281 GFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEK-ANEVSYTALIDGICKEGNLDEVERVV 339

Query: 183 LEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAER 362
           +EMSE G   DKF YTS IA LCR+G ++EAF++KN M++ G+D DLLT+S+LI+GLA +
Sbjct: 340 MEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANK 399

Query: 363 GLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQNDTSAL 485
           GLM+EA+Q+FDDM+++GI PDS+V++IL RGYLKQ++  A+
Sbjct: 400 GLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAI 440



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEAKEF---LSRAKHA-NEISHTILFDGFCKFGDSNEA 170
           GI P+ +  + ++DG  K G L  A +    + ++ H  N  ++  L +GFCK G    A
Sbjct: 106 GIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERA 165

Query: 171 EKVFLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWG 350
           E  FL+M EVG   +   YTS I    ++GN+  A +  + M +     D++ +  +I G
Sbjct: 166 EWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISG 225

Query: 351 LAERGLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQNDTSA 482
           L   G + +  +V +DMV+ G+ PD VV   L   + K  +T A
Sbjct: 226 LVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKA 269



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 38/192 (19%)
 Frame = +3

Query: 12  PDAVTVSVVMDGLCKNGLLKEAKEFLSRAKHA----NEISHTILFDGF------------ 143
           PD VT + ++DG CK G ++EA   + R ++A    + +S   LF+GF            
Sbjct: 5   PDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEVFIY 64

Query: 144 ----------------------CKFGDSNEAEKVFLEMSEVGSKLDKFGYTSRIAVLCRE 257
                                 CK GD +   K F EM + G   +   +T  I    + 
Sbjct: 65  MGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKI 124

Query: 258 GNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAERGLMVEARQVFDDMVQKGITPDSVVY 437
           GN+  A+QL   M ++   P++ T++ LI G  +RG++  A   F  M++ GI P+S VY
Sbjct: 125 GNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVY 184

Query: 438 EILTRGYLKQND 473
             +  G+ K+ +
Sbjct: 185 TSIIDGHFKKGN 196



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
 Frame = +3

Query: 12  PDAVTVSVVMDGLCKNGLLKEAKEFLSRAKHA----NEISHTILFDGFCKFGDSNEAEKV 179
           P+  T + +++G CK G+L+ A+ F  +        N   +T + DG  K G+ + A K 
Sbjct: 144 PNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKY 203

Query: 180 FLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAE 359
           F EM +   +LD   Y   I+ L   G + +  ++   M++NG+ PD +  +TL+    +
Sbjct: 204 FSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFK 263

Query: 360 RGLMVEARQVFDDMVQKGITPDSVVYEILTRGYLK 464
            G    A  V+ +++ +G  PD+V    L  G  K
Sbjct: 264 AGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCK 298


>ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
           gi|449521427|ref|XP_004167731.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
          Length = 585

 Score =  176 bits (447), Expect = 1e-42
 Identities = 88/161 (54%), Positives = 122/161 (75%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEAKEFLSRAKHANEISHTILFDGFCKFGDSNEAEKVF 182
           G + D VT+S +MDGL K+G L+EA+ +L + ++ANEI +T+  D  CK G+ ++AEK+ 
Sbjct: 366 GFEADVVTLSALMDGLSKHGYLQEARRYLVK-ENANEILYTVFIDALCKEGNLDDAEKMI 424

Query: 183 LEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAER 362
            EMSE G   DKF YTS IA LC++GN+++AF +K  M+Q  V+PDLLT+S+LI GLAE+
Sbjct: 425 KEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGGLAEK 484

Query: 363 GLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQNDTSAL 485
           GLM+EA+QVFDDM+ KGITPD V Y+IL RGY  Q + +A+
Sbjct: 485 GLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAI 525



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
 Frame = +3

Query: 12  PDAVTVSVVMDGLCKNGLLKEAKEFLSRA-KHA--NEISHTILFDGFCKFGDSNEAEKVF 182
           PD V  +++ +G  K  +  EA  +     K+   + +++    D FCK GD     ++F
Sbjct: 125 PDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMGNRMF 184

Query: 183 LEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAER 362
           L+M +VG   +   ++S I   C+ G++  AF+    M +  V P+  T+STLI G ++ 
Sbjct: 185 LDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKH 244

Query: 363 GLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQND 473
           G++  A  +F+ M+   I P+  VY  +  G+ K+ +
Sbjct: 245 GMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGN 281



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEAKEFLSRAKHA----NEISHTILFDGFCKFGDSNEA 170
           GI P+ V  S ++DG CK G L  A E+  R K      NE +++ L DG  K G    A
Sbjct: 191 GIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLARA 250

Query: 171 EKVFLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWG 350
           + +F +M       +   YTS I    ++GNV +A +  N M    +  DL  ++ +I G
Sbjct: 251 DSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVIISG 310

Query: 351 LAERGLMVEARQVFDDMVQKGITPDSVV 434
               G   ++ +  + + + G+ PD ++
Sbjct: 311 FHRVGRFDKSMEAAEYVAKNGLLPDRII 338



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
 Frame = +3

Query: 12  PDAVTVSVVMDGLCKNGLLKEAKE-FLSRAKHA---NEISHTILFDGFCKFGDSNEAEKV 179
           P  VT    +D  CK G +K     FL   K     N +  + L DG+CK G  + A + 
Sbjct: 159 PSIVTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEY 218

Query: 180 FLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAE 359
           F  M E   + ++F Y++ I    + G +  A  L   ML   + P+   ++++I G  +
Sbjct: 219 FERMKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFK 278

Query: 360 RGLMVEARQVFDDMVQKGITPDSVVYEILTRGY 458
           +G + +A +  + M  + I  D   Y ++  G+
Sbjct: 279 KGNVDDAIKYINQMFDRDIKLDLTAYTVIISGF 311



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
 Frame = +3

Query: 6   IDPDAVTVSVVMDGLCKNGLLKEA----KEFLSRAKHANEISHTILFDGFCKFGDSNEAE 173
           + P+  T S ++DG  K+G+L  A    ++ LS +   N   +T + DG  K G+ ++A 
Sbjct: 227 VRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAI 286

Query: 174 KVFLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGL 353
           K   +M +   KLD   YT  I+   R G   ++ +    + +NG+ PD +  + ++   
Sbjct: 287 KYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVH 346

Query: 354 AERGLMVEARQVFDDMVQKGITPDSVVYEILTRGYLK 464
            + G + EA   +  ++ KG   D V    L  G  K
Sbjct: 347 FKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLSK 383


>ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01740 gi|4220475|gb|AAD12698.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250397|gb|AEC05491.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/160 (50%), Positives = 115/160 (71%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEAKEFLSRAKHANEISHTILFDGFCKFGDSNEAEKVF 182
           G +PD V +S ++DG+ KNG L EA  +    K AN++ +T+L D  CK GD  E E++F
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK-ANDVMYTVLIDALCKEGDFIEVERLF 426

Query: 183 LEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAER 362
            ++SE G   DKF YTS IA LC++GN+++AF+LK  M+Q G+  DLL ++TLI+GLA +
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK 486

Query: 363 GLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQNDTSA 482
           GLMVEARQVFD+M+  GI+PDS V+++L R Y K+ + +A
Sbjct: 487 GLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAA 526



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
 Frame = +3

Query: 6   IDPDAVTVSVVMDGLCKNGLLKEA----KEFLSRAKHANEISHTILFDGFCKFGDSNEAE 173
           + P+ VT + ++DG CK G L+ A    KE        N +++T L DGFCK G+   AE
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE 253

Query: 174 KVFLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGL 353
           +++  M E   + +   YT+ I    + G+   A +    ML  G+  D+  +  +I GL
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313

Query: 354 AERGLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQNDTSA 482
              G + EA ++ +DM +  + PD V++  +   Y K     A
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
 Frame = +3

Query: 12  PDAVTVSVVMDGLCKNGLLKEA-KEFLSRAKHA---NEISHTILFDGFCKFGDSNEAEKV 179
           P+ VT S  +D  CK+G L+ A K F S  + A   N ++ T L DG+CK GD   A  +
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220

Query: 180 FLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAE 359
           + EM  V   L+   YT+ I   C++G +  A ++ + M+++ V+P+ L ++T+I G  +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280

Query: 360 RGLMVEARQVFDDMVQKGITPDSVVYEILTRG 455
           RG    A +    M+ +G+  D   Y ++  G
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
 Frame = +3

Query: 15  DAVTVSVVMDGLCKNGLLKEAKEFLSRAKH----ANEISHTILFDGFCKFGDSNEAEKVF 182
           + VT + ++DG CK G ++ A+E  SR        N + +T + DGF + GDS+ A K  
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291

Query: 183 LEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAER 362
            +M   G +LD   Y   I+ LC  G + EA ++   M ++ + PD++ F+T++    + 
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351

Query: 363 GLMVEARQVFDDMVQKGITPDSVVYEILTRGYLK 464
           G M  A  ++  ++++G  PD V    +  G  K
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
 Frame = +3

Query: 12  PDAVTVSVVMDGLCKNGLLKEAKEFLS---RAKHANEISHTILFDGFCKFGDSNEAEKVF 182
           PD V+ + + +G  K  +L E   ++    +    N ++++   D FCK G+   A K F
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF 186

Query: 183 LEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAER 362
             M       +   +T  I   C+ G++  A  L   M +  +  +++T++ LI G  ++
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246

Query: 363 GLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQNDT 476
           G M  A +++  MV+  + P+S+VY  +  G+ ++ D+
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284


>ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322611|gb|EFH53032.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 559

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/157 (47%), Positives = 111/157 (70%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEAKEFLSRAKHANEISHTILFDGFCKFGDSNEAEKVF 182
           G +PD V +S ++DG+ KNG L EA  +    K AN++ +T+L D  CK  D  E E++F
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAISYFCTEK-ANDVMYTVLIDALCKEEDFIEVERLF 426

Query: 183 LEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAER 362
            ++SE G   DKF YTS IA LC++GN+++AF+LK  M+Q G++ DL  ++TLI+GL  +
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSK 486

Query: 363 GLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQND 473
           GLMVEARQVFD+M++ G+ PDS V+++L R Y K+ +
Sbjct: 487 GLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGN 523



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
 Frame = +3

Query: 12  PDAVTVSVVMDGLCKNGLLKEA-KEFLSRAKHA---NEISHTILFDGFCKFGDSNEAEKV 179
           P+ VT S  +D  CK+G LK A K F    + A   N ++ T L DG+CK GD      +
Sbjct: 161 PNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSL 220

Query: 180 FLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAE 359
           + EM  V   L+   YT+ I   C++G +  A  +   ML++ V+P+ L ++T+I G  +
Sbjct: 221 YEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQ 280

Query: 360 RGLMVEARQVFDDMVQKGITPDSVVYEILTRG 455
           RG    A +    M+ +G+  D   Y ++  G
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
 Frame = +3

Query: 12  PDAVTVSVVMDGLCKNGLLKEAKEFLSRAKHA----NEISHTILFDGFCKFGDSNEAEKV 179
           P+ VT + ++DG CK G L+         +      N +++T L DGFCK G+   A  +
Sbjct: 196 PNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGM 255

Query: 180 FLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAE 359
           +L M E   + +   YT+ I    + G+   A +    ML  G+  D+  +  +I GL  
Sbjct: 256 YLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315

Query: 360 RGLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQNDTSA 482
            G + EA ++ +DM +  + PD +++  +   Y K     A
Sbjct: 316 IGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKA 356



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
 Frame = +3

Query: 15  DAVTVSVVMDGLCKNGLLKEAK----EFLSRAKHANEISHTILFDGFCKFGDSNEAEKVF 182
           + VT + ++DG CK G ++ A       L      N + +T + +GF + GDS+ A K  
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFL 291

Query: 183 LEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAER 362
            +M   G +LD   Y   I+ LC  G + EA ++   M +  + PD++ F+T++    + 
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKS 351

Query: 363 GLMVEARQVFDDMVQKGITPDSVVYEILTRGYLK 464
           G M  A  ++  ++++G  PD V    +  G  K
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/164 (24%), Positives = 84/164 (51%), Gaps = 7/164 (4%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEAKEFLS--RAKHA-----NEISHTILFDGFCKFGDS 161
           G +PD ++ + ++DG C+NG ++ A   L   RA +      + +S   LF+GF K    
Sbjct: 86  GCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKML 145

Query: 162 NEAEKVFLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTL 341
           +E   V++ +       +   Y++ I + C+ G +  A +  N M ++ + P+++TF+ L
Sbjct: 146 DEV-FVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCL 204

Query: 342 IWGLAERGLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQND 473
           I G  + G +     ++++M +  ++ + V Y  L  G+ K+ +
Sbjct: 205 IDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGE 248


>ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
           gi|355518643|gb|AET00267.1| Auxin response factor
           [Medicago truncatula]
          Length = 948

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/158 (39%), Positives = 91/158 (57%), Gaps = 4/158 (2%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEAKEFLS----RAKHANEISHTILFDGFCKFGDSNEA 170
           G +PDA T ++++DGLCK G L  A EFL     +    N I++TIL DGFCK G   EA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 171 EKVFLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWG 350
            KV   MS  G  L+  GY   I  LC++G + +A Q+   M   G  PD+ TF++LI+G
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 351 LAERGLMVEARQVFDDMVQKGITPDSVVYEILTRGYLK 464
           L +   M EA  ++ DM+ +G+  ++V Y  L   +L+
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEA----KEFLSRAKHANEISHTILFDGFCKFGDSNEA 170
           G  PD  T + ++ GLCKN  ++EA    ++ L     AN +++  L   F +     +A
Sbjct: 472 GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531

Query: 171 EKVFLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWG 350
           +K+  EM   G  LD   Y   I  LC+ G   +   L   M    + P + + + LI  
Sbjct: 532 DKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINS 591

Query: 351 LAERGLMVEARQVFDDMVQKGITPDSVVYEILTRGYLK 464
               G + +A Q   DM+Q+G+TPD V Y  L  G  K
Sbjct: 592 FCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK 629



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 5/164 (3%)
 Frame = +3

Query: 3    GIDPDAVTVSVVMDGLCKNGLLKEAKEFLSRAKHANEI-----SHTILFDGFCKFGDSNE 167
            G   D +T + ++  LCK G  ++    + +     EI     S  IL + FC+ G  N+
Sbjct: 542  GCPLDNITYNGLIKALCKTGATEKCLGLIEQM-FGEEIFPSINSCNILINSFCRTGKVND 600

Query: 168  AEKVFLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIW 347
            A +   +M + G   D   Y S I  LC+ G   EA  L N +   G+ PD +T++TLI 
Sbjct: 601  ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLIS 660

Query: 348  GLAERGLMVEARQVFDDMVQKGITPDSVVYEILTRGYLKQNDTS 479
                 GL  +A Q+    V  G  P+ + + IL   ++K N  S
Sbjct: 661  RYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDS 704



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
 Frame = +3

Query: 3   GIDPDAVTVSVVMDGLCKNGLLKEAKEFL-SRAKHA---NEISHTILFDGFCKFGDSNEA 170
           GI P   T  VVM   C    +  A   L    KH    N I + +L     +    NEA
Sbjct: 195 GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEA 254

Query: 171 EKVFLEMSEVGSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWG 350
            K+  EM  +G + D   +   I  LC+ G + EA +L + ML      D L    L+ G
Sbjct: 255 MKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314

Query: 351 LAERGLMVEARQVFDDMVQKGITPDSVVYEILTRGYL 461
           L   G + EAR     M+ K   P++V+Y  L  GY+
Sbjct: 315 LCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYV 347



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/145 (24%), Positives = 65/145 (44%)
 Frame = +3

Query: 21  VTVSVVMDGLCKNGLLKEAKEFLSRAKHANEISHTILFDGFCKFGDSNEAEKVFLEMSEV 200
           V + +++ G C         + LSR       +  ++   FC   + + A  +  +M++ 
Sbjct: 170 VVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKH 229

Query: 201 GSKLDKFGYTSRIAVLCREGNVMEAFQLKNVMLQNGVDPDLLTFSTLIWGLAERGLMVEA 380
           G   +   Y   I  L     V EA +L   M   G +PD+ TF+ +I GL + G + EA
Sbjct: 230 GCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEA 289

Query: 381 RQVFDDMVQKGITPDSVVYEILTRG 455
            ++ D M+ +  T D+++   L  G
Sbjct: 290 AKLHDRMLLRDFTADALIQGYLMHG 314