BLASTX nr result

ID: Dioscorea21_contig00031048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031048
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302831.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002524809.1| elongation factor tu, putative [Ricinus comm...    55   5e-06
ref|XP_002320388.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002302831.1| predicted protein [Populus trichocarpa] gi|222844557|gb|EEE82104.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/66 (53%), Positives = 40/66 (60%)
 Frame = -2

Query: 199 ASVALRNPNSRRLVGFSSSYYHSCCRAVGCGLESPQSLLPGISERKALDYGSWWQRSMAT 20
           AS+ALRNPNS+RL+ FSS +Y  CCR       SP SL   +         S W RSMAT
Sbjct: 2   ASLALRNPNSKRLLPFSSQFY-CCCRG------SPSSLTESLLSSNDRTSSSPWWRSMAT 54

Query: 19  FTRTKP 2
           FTRTKP
Sbjct: 55  FTRTKP 60


>ref|XP_002524809.1| elongation factor tu, putative [Ricinus communis]
           gi|223535993|gb|EEF37652.1| elongation factor tu,
           putative [Ricinus communis]
          Length = 449

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%)
 Frame = -2

Query: 199 ASVALRNPNSRRLVGFSSSYYHSCCRAVGCGLESPQSLLPGISERKALDYGSWWQRSMAT 20
           A+ ALRNPNS+RL+ FSS  Y SC      G  +  S    +S   + ++  WW RSMAT
Sbjct: 2   AAAALRNPNSKRLLPFSSQIYWSC----RGGSAACASTHFSLSSNDSFNHNPWW-RSMAT 56

Query: 19  FTRTKP 2
           FTRTKP
Sbjct: 57  FTRTKP 62


>ref|XP_002320388.1| predicted protein [Populus trichocarpa] gi|222861161|gb|EEE98703.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/66 (50%), Positives = 38/66 (57%)
 Frame = -2

Query: 199 ASVALRNPNSRRLVGFSSSYYHSCCRAVGCGLESPQSLLPGISERKALDYGSWWQRSMAT 20
           ASV LRNPNS+RL+ FSS   H CCR       S    L   ++R +    S W RSMAT
Sbjct: 2   ASVVLRNPNSKRLLPFSSQ-IHCCCRGSASTHSSISESLSSSNDRTS---SSPWWRSMAT 57

Query: 19  FTRTKP 2
           FTR KP
Sbjct: 58  FTRNKP 63


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