BLASTX nr result

ID: Dioscorea21_contig00031035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031035
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...   175   3e-42
ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arab...   173   1e-41
ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...   173   1e-41
ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-...   173   1e-41
ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-...   173   1e-41

>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score =  175 bits (444), Expect = 3e-42
 Identities = 80/107 (74%), Positives = 98/107 (91%), Gaps = 1/107 (0%)
 Frame = +1

Query: 4   KLREYELQHILKEGGVLLTTYDIVRNNYKSIRAD-WYAHEESDEGILWDYTILDEGHIIK 180
           KLREYELQ+IL++ GVLLTTYDIVRNN KS++ + ++  E+++EG  WDY ILDEGH+IK
Sbjct: 411 KLREYELQYILQDNGVLLTTYDIVRNNSKSLQGNNYFDDEDNEEGATWDYMILDEGHLIK 470

Query: 181 NPNTQRAKSLLEVPSSHRIVISGTPIQNNLKELWALFNFCCPEILGD 321
           NP+TQRAKSLLE+PS+HRI+ISGTP+QNNLKELWALFNFCCPE+LGD
Sbjct: 471 NPSTQRAKSLLEIPSAHRIIISGTPLQNNLKELWALFNFCCPELLGD 517


>ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp.
           lyrata] gi|297312419|gb|EFH42843.1| hypothetical protein
           ARALYDRAFT_496587 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score =  173 bits (439), Expect = 1e-41
 Identities = 82/109 (75%), Positives = 94/109 (86%), Gaps = 1/109 (0%)
 Frame = +1

Query: 4   KLREYELQHILKEGGVLLTTYDIVRNNYKSIRAD-WYAHEESDEGILWDYTILDEGHIIK 180
           K REY+L HIL+  GVLLTTYDIVRNN K+++ D  Y  E+ ++GI WDY ILDEGH+IK
Sbjct: 469 KAREYDLHHILQGKGVLLTTYDIVRNNTKALQGDDHYTDEDDEDGIKWDYMILDEGHLIK 528

Query: 181 NPNTQRAKSLLEVPSSHRIVISGTPIQNNLKELWALFNFCCPEILGDKN 327
           NPNTQRAKSLLE+PSSHRI+ISGTPIQNNLKELWALFNF CP +LGDKN
Sbjct: 529 NPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALFNFSCPGLLGDKN 577


>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
           gi|223544553|gb|EEF46070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1109

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/111 (72%), Positives = 97/111 (87%), Gaps = 1/111 (0%)
 Frame = +1

Query: 4   KLREYELQHILKEGGVLLTTYDIVRNNYKSIRAD-WYAHEESDEGILWDYTILDEGHIIK 180
           K R+YELQ+IL++ G+LLTTYDIVRNN KS+R D ++A EES++G  WDY ILDEGH+IK
Sbjct: 486 KARQYELQYILQDKGILLTTYDIVRNNSKSLRGDDYFADEESEDGYTWDYMILDEGHLIK 545

Query: 181 NPNTQRAKSLLEVPSSHRIVISGTPIQNNLKELWALFNFCCPEILGDKNEY 333
           NP+TQRAKSLLE+PS+HRI+ISGTPIQNNLKELW LFNF CP +LGD N +
Sbjct: 546 NPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWTLFNFSCPNLLGDYNGF 596


>ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
           sativus]
          Length = 565

 Score =  173 bits (438), Expect = 1e-41
 Identities = 78/111 (70%), Positives = 100/111 (90%), Gaps = 1/111 (0%)
 Frame = +1

Query: 4   KLREYELQHILKEGGVLLTTYDIVRNNYKSIRADWYAH-EESDEGILWDYTILDEGHIIK 180
           KLR+YEL +IL++ GVLLTTYDIVRNN KS++ + ++  EE+++G  WDY ILDEGH+IK
Sbjct: 414 KLRQYELNYILQDKGVLLTTYDIVRNNSKSLQGNCFSEDEETEDGTTWDYMILDEGHLIK 473

Query: 181 NPNTQRAKSLLEVPSSHRIVISGTPIQNNLKELWALFNFCCPEILGDKNEY 333
           NP+TQRAKSLL++PS+HRI+ISGTP+QNNLKELWALFNFCCP++LGDK+ Y
Sbjct: 474 NPSTQRAKSLLDIPSAHRIIISGTPLQNNLKELWALFNFCCPDLLGDKHWY 524


>ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 938

 Score =  173 bits (438), Expect = 1e-41
 Identities = 79/107 (73%), Positives = 98/107 (91%), Gaps = 1/107 (0%)
 Frame = +1

Query: 4   KLREYELQHILKEGGVLLTTYDIVRNNYKSIRAD-WYAHEESDEGILWDYTILDEGHIIK 180
           KLREYELQ+IL++ GVLLTTYDIVRNN KS++ + ++  E+++EG+ WDY ILDEGH+IK
Sbjct: 346 KLREYELQYILQDKGVLLTTYDIVRNNSKSLQGNNYFDDEDNEEGVTWDYMILDEGHLIK 405

Query: 181 NPNTQRAKSLLEVPSSHRIVISGTPIQNNLKELWALFNFCCPEILGD 321
           NP+TQRAKSLLE+PS+H I+ISGTP+QNNLKELWALFNFCCPE+LGD
Sbjct: 406 NPSTQRAKSLLEIPSAHCIIISGTPLQNNLKELWALFNFCCPELLGD 452


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