BLASTX nr result

ID: Dioscorea21_contig00031029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00031029
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525457.1| leucine-rich repeat containing protein, puta...    39   3e-06

>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223535270|gb|EEF36947.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1177

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
 Frame = -3

Query: 378 LLEDAEDKQA-----RHWLMKLKDAAYDNDDLLD 292
           +LEDAED+Q      R+WL KLKDA  D DD LD
Sbjct: 48  VLEDAEDRQVKDKAVRNWLTKLKDAVLDADDALD 81



 Score = 36.6 bits (83), Expect(2) = 3e-06
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = -2

Query: 295 RLLHSGISTSNGNK--ASSHLLILRQRRFACFYERSKASIRG*KVSLREQDVIGLQVLGR 122
           + L   + + N +K   SS LL+ +    A  Y + +  ++G    L   + I L+ +  
Sbjct: 86  KALQQKVKSQNDSKHWVSSFLLVPKS---AALYVKMEFKMKGINERL---NAIALERVNF 139

Query: 121 SKHNRV-ELEIKNEIEEKPQTSSLVVGSHVFGREQDKENIV 2
             +  + ++E + E +E+ QT S V+ S +FGRE+DK +IV
Sbjct: 140 HFNEGIGDVEKEKEDDERRQTHSFVIESEIFGREKDKADIV 180


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