BLASTX nr result
ID: Dioscorea21_contig00030964
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00030964
(294 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28351.3| unnamed protein product [Vitis vinifera] 79 3e-13
ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containi... 79 3e-13
ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2... 78 9e-13
ref|XP_002523781.1| pentatricopeptide repeat-containing protein,... 77 1e-12
ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat... 76 2e-12
>emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 79.3 bits (194), Expect = 3e-13
Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Frame = +1
Query: 7 QNGLGVMEAMDLFVEMLMEGLPPDDYTFGSLLANVGAPGVEE----IHAQVIKRGLGGNV 174
QNGL +A+ LF +M +EG+ P+ +TF ++L + A G E +H VIK GL +
Sbjct: 170 QNGLNE-QALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTI 228
Query: 175 VVGSTLLDAYARCLNPQDACQVFKTMEDRNTVAWNSVIS 291
VG+++++ Y++ L DA VF +ME+RN V+WNS+I+
Sbjct: 229 FVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIA 267
Score = 60.5 bits (145), Expect = 1e-07
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Frame = +1
Query: 31 AMDLFVEMLME-GLPPDDYTFGSLLANVGAPGV-----EEIHAQVIKRGLGGNVVVGSTL 192
AM+LF +M E G+ P+++TF S+L AP ++ H+ IK G + V S L
Sbjct: 380 AMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSAL 439
Query: 193 LDAYARCLNPQDACQVFKTMEDRNTVAWNSVIS 291
+ YA+ N + A +VFK DR+ V+WNS+IS
Sbjct: 440 VTMYAKRGNIESANEVFKRQVDRDLVSWNSMIS 472
>ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 79.3 bits (194), Expect = 3e-13
Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Frame = +1
Query: 7 QNGLGVMEAMDLFVEMLMEGLPPDDYTFGSLLANVGAPGVEE----IHAQVIKRGLGGNV 174
QNGL +A+ LF +M +EG+ P+ +TF ++L + A G E +H VIK GL +
Sbjct: 170 QNGLNE-QALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTI 228
Query: 175 VVGSTLLDAYARCLNPQDACQVFKTMEDRNTVAWNSVIS 291
VG+++++ Y++ L DA VF +ME+RN V+WNS+I+
Sbjct: 229 FVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIA 267
Score = 62.4 bits (150), Expect = 4e-08
Identities = 27/87 (31%), Positives = 56/87 (64%)
Frame = +1
Query: 31 AMDLFVEMLMEGLPPDDYTFGSLLANVGAPGVEEIHAQVIKRGLGGNVVVGSTLLDAYAR 210
AM+LF +M EG+ P+ +T+ ++L A +IHA V+K + VG+ L D+Y++
Sbjct: 380 AMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSK 439
Query: 211 CLNPQDACQVFKTMEDRNTVAWNSVIS 291
+ +A ++F+ +++++ VAW++++S
Sbjct: 440 IGDANEAAKIFELIDEKDIVAWSAMLS 466
Score = 62.0 bits (149), Expect = 5e-08
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Frame = +1
Query: 31 AMDLFVEMLMEGLPPDDYTFGSLLANVGAPGV-----EEIHAQVIKRGLGGNVVVGSTLL 195
A+ +F+++ EG+ P+++TF S+L AP ++ H+ IK G + V S L+
Sbjct: 477 AVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALV 536
Query: 196 DAYARCLNPQDACQVFKTMEDRNTVAWNSVIS 291
YA+ N + A +VFK DR+ V+WNS+IS
Sbjct: 537 TMYAKRGNIESANEVFKRQVDRDLVSWNSMIS 568
>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
predicted protein [Populus trichocarpa]
Length = 743
Score = 77.8 bits (190), Expect = 9e-13
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Frame = +1
Query: 7 QNGLGVMEAMDLFVEMLMEGLPPDDYTFGSLLANVGAPGV----EEIHAQVIKRGLGGNV 174
QNGL EAMDLF +M EG+ D YTFGS+L G +EIH +I+ G NV
Sbjct: 247 QNGLEA-EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNV 305
Query: 175 VVGSTLLDAYARCLNPQDACQVFKTMEDRNTVAWNSVI 288
VGS L+D Y +C + + A VFK M ++N V+W +++
Sbjct: 306 FVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAML 343
Score = 58.5 bits (140), Expect = 5e-07
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Frame = +1
Query: 7 QNGLGVMEAMDLFVEMLMEGLPPDDYTFGSLLAN-VGAPGVEE---IHAQVIKRGLGGNV 174
QNG EA+ +F +M G+ PDD+T GS++++ +EE H Q + GL +
Sbjct: 348 QNGFSE-EAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFI 406
Query: 175 VVGSTLLDAYARCLNPQDACQVFKTMEDRNTVAWNSVIS 291
V + L+ Y +C + +D+ Q+F M R+ V+W +++S
Sbjct: 407 TVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVS 445
Score = 56.6 bits (135), Expect = 2e-06
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Frame = +1
Query: 22 VMEAMDLFVEMLMEG-LPPDDYTFGSLLANVGAPGV----EEIHAQVIKRGLGGNVVVGS 186
V+EA+ + M+ +G L + TF ++L V + G +IH Q++K G G V VGS
Sbjct: 118 VVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGS 177
Query: 187 TLLDAYARCLNPQDACQVFKTMEDRNTVAWNSVIS 291
+L+D YA+ A QVF +++RN V +N++I+
Sbjct: 178 SLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMIT 212
>ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536869|gb|EEF38507.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 661
Score = 77.0 bits (188), Expect = 1e-12
Identities = 40/95 (42%), Positives = 63/95 (66%)
Frame = +1
Query: 7 QNGLGVMEAMDLFVEMLMEGLPPDDYTFGSLLANVGAPGVEEIHAQVIKRGLGGNVVVGS 186
QNGL +A++LF EM EG+ P+DYTF ++LA E+HAQVIK + VG+
Sbjct: 378 QNGLAE-QAVNLFCEMSREGVRPNDYTFSTILAAQPVVSPFEVHAQVIKSDYEKSPSVGT 436
Query: 187 TLLDAYARCLNPQDACQVFKTMEDRNTVAWNSVIS 291
LLDAY + N +A +VF+ ++D++ VAW+++++
Sbjct: 437 ALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVA 471
Score = 56.2 bits (134), Expect = 3e-06
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Frame = +1
Query: 4 AQNGLGVMEAMDLFVEMLMEGLPPDDYTFGSLLANVG-----APGVEEIHAQVIKRGLGG 168
A NGL MEA++ F EM + P+ +TF ++L + A +IH VIK G
Sbjct: 173 AHNGLN-MEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNGFEA 231
Query: 169 NVVVGSTLLDAYARCLNPQDACQVFKTMEDRNTVAWNSVIS 291
+ V ++L++ Y++ ++A VF M R+ ++WNS+++
Sbjct: 232 TIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVA 272
>ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Frame = +1
Query: 31 AMDLFVEMLMEGLPPDDYTFGSLLANVGAPGV----EEIHAQVIKRGLGGNVVVGSTLLD 198
A++ M G D Y+FGS+L V G +++H+ ++K G GNV GS LLD
Sbjct: 84 ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLD 143
Query: 199 AYARCLNPQDACQVFKTMEDRNTVAWNSVIS 291
YA+C +DA +VFK++ RN+V WN++IS
Sbjct: 144 MYAKCERVEDAFEVFKSINIRNSVTWNALIS 174
Score = 56.6 bits (135), Expect = 2e-06
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Frame = +1
Query: 52 MLMEGLPPDDYTFGSLLANVGAPGVE----EIHAQVIKRGLGGNVVVGSTLLDAYARCLN 219
M +EG+ DD TF LL + P + ++HA+++K GL + V + ++ AY+ C +
Sbjct: 192 MELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGS 251
Query: 220 PQDACQVFK-TMEDRNTVAWNSVISA 294
+DA +VF +E R+ V WNS+++A
Sbjct: 252 IEDAERVFDGAIETRDLVTWNSMLAA 277