BLASTX nr result

ID: Dioscorea21_contig00030786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030786
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27342.3| unnamed protein product [Vitis vinifera]              111   2e-22
ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253...   111   2e-22
emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]   111   2e-22
ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinu...   105   1e-20
ref|XP_002327568.1| predicted protein [Populus trichocarpa] gi|2...   102   8e-20

>emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score =  111 bits (277), Expect = 2e-22
 Identities = 56/106 (52%), Positives = 69/106 (65%)
 Frame = +3

Query: 144  SNGLAGAGSVVKSQHETRSTDGTLVTKADRRTNEINGSKEEWVEQDEIGVYITFIALPSG 323
            SN L       + Q  TRS + + + K D R N    SK EWVEQ E GVYITFI L SG
Sbjct: 802  SNSLRSMYGRDECQGHTRSVEDSCLEKIDPRQNGTKPSKLEWVEQYEPGVYITFITLASG 861

Query: 324  QRGLKRVRFSRKHFGEKQAERWWKENETRIYTKYNVEQILTSGRNR 461
            QRGLKRVRFSRK F EK+AERWW+EN+  +Y  Y +E  ++S +N+
Sbjct: 862  QRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGIEGYISSSQNK 907


>ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score =  111 bits (277), Expect = 2e-22
 Identities = 56/106 (52%), Positives = 69/106 (65%)
 Frame = +3

Query: 144  SNGLAGAGSVVKSQHETRSTDGTLVTKADRRTNEINGSKEEWVEQDEIGVYITFIALPSG 323
            SN L       + Q  TRS + + + K D R N    SK EWVEQ E GVYITFI L SG
Sbjct: 915  SNSLRSMYGRDECQGHTRSVEDSCLEKIDPRQNGTKPSKLEWVEQYEPGVYITFITLASG 974

Query: 324  QRGLKRVRFSRKHFGEKQAERWWKENETRIYTKYNVEQILTSGRNR 461
            QRGLKRVRFSRK F EK+AERWW+EN+  +Y  Y +E  ++S +N+
Sbjct: 975  QRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGIEGYISSSQNK 1020


>emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  111 bits (277), Expect = 2e-22
 Identities = 56/106 (52%), Positives = 69/106 (65%)
 Frame = +3

Query: 144  SNGLAGAGSVVKSQHETRSTDGTLVTKADRRTNEINGSKEEWVEQDEIGVYITFIALPSG 323
            SN L       + Q  TRS + + + K D R N    SK EWVEQ E GVYITFI L SG
Sbjct: 974  SNSLRSMYGRDECQGHTRSVEDSCLEKIDPRQNGTKPSKLEWVEQYEPGVYITFITLASG 1033

Query: 324  QRGLKRVRFSRKHFGEKQAERWWKENETRIYTKYNVEQILTSGRNR 461
            QRGLKRVRFSRK F EK+AERWW+EN+  +Y  Y +E  ++S +N+
Sbjct: 1034 QRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGIEGYISSSQNK 1079


>ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223534074|gb|EEF35792.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 1086

 Score =  105 bits (262), Expect = 1e-20
 Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
 Frame = +3

Query: 60   KTILVGSHLSHDTRIMEGRQMEVSVRQS----SNGLAGAGSVVKSQHETRSTDGTLVTKA 227
            +  L   HL  +  + + RQ++ S+  S    SN L    S        R  + +   +A
Sbjct: 947  RATLASVHLPPEVNLPKDRQLD-SLSSSPIVFSNTLKSMDSRGLCHEIGRLENDSQTPRA 1005

Query: 228  DRRTNEINGSKEEWVEQDEIGVYITFIALPSGQRGLKRVRFSRKHFGEKQAERWWKENET 407
            D + N   GS+ EWVEQ E GVYITF  LP G++GLKRVRFSRK F EK+AERWW+EN+ 
Sbjct: 1006 DSKQNGTKGSRLEWVEQYEPGVYITFTVLPGGEKGLKRVRFSRKRFAEKEAERWWEENQV 1065

Query: 408  RIYTKYNVEQILTSGRNR 461
             +Y KY +E  + S +++
Sbjct: 1066 TVYQKYGIEGYVDSNQHQ 1083


>ref|XP_002327568.1| predicted protein [Populus trichocarpa] gi|222836122|gb|EEE74543.1|
            predicted protein [Populus trichocarpa]
          Length = 973

 Score =  102 bits (254), Expect = 8e-20
 Identities = 49/82 (59%), Positives = 56/82 (68%)
 Frame = +3

Query: 219  TKADRRTNEINGSKEEWVEQDEIGVYITFIALPSGQRGLKRVRFSRKHFGEKQAERWWKE 398
            T  D R N    SK EWVEQ E GVYITF  LPSG +GLKRVRFSRK F EK+AERWW+E
Sbjct: 890  TTTDPRRNGTKASKHEWVEQYEPGVYITFTILPSGLKGLKRVRFSRKRFAEKEAERWWEE 949

Query: 399  NETRIYTKYNVEQILTSGRNRT 464
            N+  +Y KY +E    S +N T
Sbjct: 950  NQAIVYQKYGIEGYNKSNQNLT 971


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