BLASTX nr result

ID: Dioscorea21_contig00030351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030351
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
emb|CBI15512.3| unnamed protein product [Vitis vinifera]               67   1e-09
emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]    67   1e-09
ref|XP_002455767.1| hypothetical protein SORBIDRAFT_03g024580 [S...    67   2e-09
gb|EAY74462.1| hypothetical protein OsI_02350 [Oryza sativa Indi...    65   4e-09

>ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Glycine max]
          Length = 626

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
 Frame = +3

Query: 3   LISSRLKQAAAHHPIPFLSDHEEAALLPYLRPDDISSILLRSQSLPIPSFRFFRWATSRX 182
           LISS LK  +++  +   S+++   +LP++ P +IS ILLR QS       FF W     
Sbjct: 55  LISSILKHKSSNLSLLHSSNNDIKGILPHMGPHEISRILLRCQSDHSSVLTFFNW-VKND 113

Query: 183 XXXXXXXXXXXILAHILTSSRLFSLALFTLSDLVR--------AHPNHDAFASLVSSSSI 338
                      ++ HIL  SR+FS A+  LS+L++          PN   + +LV  +  
Sbjct: 114 LNITPTLHNYCVIVHILAWSRVFSHAMNLLSELIQLVEVEGVCVPPNDGIYENLVECTED 173

Query: 339 CNANPAVFGMLIKVYVR 389
           CN NPA+F MLIK YV+
Sbjct: 174 CNWNPAIFDMLIKAYVK 190


>emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   LISSRLKQAAAHHPIPFLSDHEEAALLPYLRPDDISSILLRSQSLPIPSFRFFRWATSRX 182
           LI S LKQ   H+    L   E  ALLP+L   +IS +LLR QS    +  FF W  +  
Sbjct: 72  LICSNLKQ---HNSNLALLHTEVNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKN-D 127

Query: 183 XXXXXXXXXXXILAHILTSSRLFSLALFTLSDLVRAH----PNHDAFASLVSSSSICNAN 350
                      I+ H L  SR FS A+  L +LV       P+ D F +L+  +  CN +
Sbjct: 128 LGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKNLILCTEDCNWD 187

Query: 351 PAVFGMLIKVYVR 389
           P VF ML+K Y+R
Sbjct: 188 PVVFDMLVKAYLR 200


>emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 49/133 (36%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   LISSRLKQAAAHHPIPFLSDHEEAALLPYLRPDDISSILLRSQSLPIPSFRFFRWATSRX 182
           LI S LKQ   H+    L   E  ALLP+L   +IS +LLR QS    +  FF W  +  
Sbjct: 117 LICSNLKQ---HNSNLALLHTEVNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKN-D 172

Query: 183 XXXXXXXXXXXILAHILTSSRLFSLALFTLSDLVRAH----PNHDAFASLVSSSSICNAN 350
                      I+ H L  SR FS A+  L +LV       P  D F +L+  +  CN +
Sbjct: 173 LGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKNLILCTEDCNWD 232

Query: 351 PAVFGMLIKVYVR 389
           P VF ML+K Y+R
Sbjct: 233 PVVFDMLVKAYLR 245


>ref|XP_002455767.1| hypothetical protein SORBIDRAFT_03g024580 [Sorghum bicolor]
           gi|241927742|gb|EES00887.1| hypothetical protein
           SORBIDRAFT_03g024580 [Sorghum bicolor]
          Length = 558

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = +3

Query: 78  LLPYLRPDDISSILLRS-QSLPIPSFRFFRWATSRXXXXXXXXXXXXILAHILTSSRLFS 254
           LLPYL  D++++++LR+  S P+P+ RF     +              LAH L SSRLFS
Sbjct: 50  LLPYLGHDELTAVVLRAGHSHPLPTLRFL---LALPPPLQPSPPHLAFLAHSLASSRLFS 106

Query: 255 LALFTLSDLVRAHPNHDAFASLVSSSSICNANPAVFGMLIKVYVR 389
            AL  LS L+R HP HDA  +L+ +S+    +P++ G+L+K  +R
Sbjct: 107 HALGALSHLIRLHPRHDALPTLLVASATA-PHPSLPGLLVKALLR 150


>gb|EAY74462.1| hypothetical protein OsI_02350 [Oryza sativa Indica Group]
          Length = 596

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
 Frame = +3

Query: 60  DHEEAALLPYLRPDDISSILLRS-QSLPIPSFRFFRWATSRXXXXXXXXXXXXILAHILT 236
           + E + LLPYL  D++++++LR+  S P+P+ RF     +              LA  L 
Sbjct: 46  EDELSRLLPYLGSDELTAVVLRAGHSHPLPTLRFL---LALPPPAQPSPTHLAFLAGSLA 102

Query: 237 SSRLFSLALFTLSDLVRAHPNHDAFASLVSSSSICNANPAVFGMLIKVYVR 389
           SSRLFS AL  LS L+R HP HDA  +L+ SS+    +P++ G+L+K  +R
Sbjct: 103 SSRLFSQALDALSHLLRLHPGHDALPTLLRSSATA-PHPSLPGLLVKALLR 152


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