BLASTX nr result

ID: Dioscorea21_contig00030314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030314
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516255.1| conserved hypothetical protein [Ricinus comm...   313   3e-83
ref|XP_003541313.1| PREDICTED: uncharacterized protein LOC100788...   311   2e-82
ref|XP_002871953.1| hypothetical protein ARALYDRAFT_910111 [Arab...   309   8e-82
ref|XP_004136111.1| PREDICTED: uncharacterized protein LOC101208...   308   2e-81
ref|NP_568398.1| protein trichome birefringence-like 16 [Arabido...   308   2e-81

>ref|XP_002516255.1| conserved hypothetical protein [Ricinus communis]
            gi|223544741|gb|EEF46257.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 490

 Score =  313 bits (803), Expect = 3e-83
 Identities = 141/205 (68%), Positives = 167/205 (81%)
 Frame = +2

Query: 395  TSSLEPRKDNKDLTKSPAQETGCNYAKGKWVADKKRPLYSGFQCKQWLSSMWACRLMQRK 574
            +SSL   +D K+ T     +  CNY KGKWV D  +PLYSGF CKQWL+ MWACRLMQR 
Sbjct: 121  SSSLLGEQDEKNFTMFMNNQA-CNYTKGKWVVDDNQPLYSGFGCKQWLAQMWACRLMQRT 179

Query: 575  DFSYESFRWQPKDCDMPEFKGSEFLKRMQGKTIALVGDSLGRQQFQSLMCMVTGGKENSE 754
            DFSYE  RWQP +C M  FKGSEFLKRM+GKT+A VGDSLGRQQFQSLMCM+TGGKE  +
Sbjct: 180  DFSYEMLRWQPNNCQMEAFKGSEFLKRMEGKTLAFVGDSLGRQQFQSLMCMITGGKETPD 239

Query: 755  VEDIGSEYGLVQEPGAKRPAGWAYRFPSTNTTILYYWSASLCELEPLNLTDPATNYAMHL 934
            V D+G EYGLVQ  G+ RP GWAYRFPSTNT++LYYWSA LC+LEP+++ +PAT+YAMHL
Sbjct: 240  VLDVGREYGLVQPRGSVRPNGWAYRFPSTNTSVLYYWSACLCDLEPIDIKNPATDYAMHL 299

Query: 935  DRPVPFLKYYLHKLDVVVLNTGHHW 1009
            DRP  FL+++LHK+DV+VLNTGHHW
Sbjct: 300  DRPPSFLRHFLHKIDVLVLNTGHHW 324


>ref|XP_003541313.1| PREDICTED: uncharacterized protein LOC100788136 [Glycine max]
          Length = 680

 Score =  311 bits (797), Expect = 2e-82
 Identities = 151/259 (58%), Positives = 180/259 (69%), Gaps = 31/259 (11%)
 Frame = +2

Query: 326  EHQPVAEAGHVHDVHSVNSSRSPTSSLEPRKD---------------NKDLTKSP----- 445
            +H+ + E    HDV + +S   PTSS   R +               N  +TKSP     
Sbjct: 268  KHKRILEGEKNHDVQTFSS---PTSSGAKRNEAEGEKSLRQEENKHRNDFVTKSPQIISL 324

Query: 446  -----------AQETGCNYAKGKWVADKKRPLYSGFQCKQWLSSMWACRLMQRKDFSYES 592
                        +   CNYAKGKWV D  RPLYSGF CKQWLS MWACRLMQR DF YE 
Sbjct: 325  TGGKDNNWNNATENKVCNYAKGKWVPDNNRPLYSGFGCKQWLSGMWACRLMQRTDFEYEK 384

Query: 593  FRWQPKDCDMPEFKGSEFLKRMQGKTIALVGDSLGRQQFQSLMCMVTGGKENSEVEDIGS 772
             RWQPKDC M EF+GS+FL+RMQ KT+A VGDSLGRQQFQSLMCM+TGGK+  EVED+G 
Sbjct: 385  LRWQPKDCQMEEFEGSKFLRRMQNKTLAFVGDSLGRQQFQSLMCMITGGKDKLEVEDVGR 444

Query: 773  EYGLVQEPGAKRPAGWAYRFPSTNTTILYYWSASLCELEPLNLTDPATNYAMHLDRPVPF 952
            EYGLV   G+ RP+GWA+RF STNTTILYYWSASLC++EP+++ +P T+YAMHLDRP  F
Sbjct: 445  EYGLVIAEGSARPSGWAFRFSSTNTTILYYWSASLCDVEPIDVNNPNTDYAMHLDRPPAF 504

Query: 953  LKYYLHKLDVVVLNTGHHW 1009
            L+ Y+HK +V+VLNTGHHW
Sbjct: 505  LRQYIHKFNVLVLNTGHHW 523


>ref|XP_002871953.1| hypothetical protein ARALYDRAFT_910111 [Arabidopsis lyrata subsp.
            lyrata] gi|297317790|gb|EFH48212.1| hypothetical protein
            ARALYDRAFT_910111 [Arabidopsis lyrata subsp. lyrata]
          Length = 555

 Score =  309 bits (791), Expect = 8e-82
 Identities = 147/280 (52%), Positives = 193/280 (68%), Gaps = 4/280 (1%)
 Frame = +2

Query: 182  KTPLISSLIPPETLDVISTETVKLTPDTHLKEYKQLSPNGHQSTVNTLEHQPVAEAGHVH 361
            KTP I      + ++ +  E +   P     +Y++ +P   +  +  ++H+     G   
Sbjct: 129  KTPTIGE----KKVEQVEHEVIASEP-----KYRK-TPTREEIKLEKVKHEVAIGDGEAK 178

Query: 362  DVHSVNSSRSPTSS--LEPRKDNKDLTKSPAQETG--CNYAKGKWVADKKRPLYSGFQCK 529
                +  + S   S  L   ++  D + S A+ T   CNYAKGKWV D  RPLYSG QCK
Sbjct: 179  KTTHIKETNSDPESNILATDEERTDGSTSTARITNQACNYAKGKWVVDNHRPLYSGSQCK 238

Query: 530  QWLSSMWACRLMQRKDFSYESFRWQPKDCDMPEFKGSEFLKRMQGKTIALVGDSLGRQQF 709
            QWL+SMWACRLMQR DF++ES RWQPKDC M EF+GS+FL+RM+ KT+A VGDSLGRQQF
Sbjct: 239  QWLASMWACRLMQRTDFAFESLRWQPKDCSMEEFEGSKFLRRMKNKTLAFVGDSLGRQQF 298

Query: 710  QSLMCMVTGGKENSEVEDIGSEYGLVQEPGAKRPAGWAYRFPSTNTTILYYWSASLCELE 889
            QS+MCM+TGGKE  +V D+G E+G +   G  RP GWAYRFP TNTT+LY+WS++LC++E
Sbjct: 299  QSMMCMITGGKERLDVLDVGPEFGFITSEGGARPGGWAYRFPETNTTVLYHWSSTLCDIE 358

Query: 890  PLNLTDPATNYAMHLDRPVPFLKYYLHKLDVVVLNTGHHW 1009
            PLN+TDPAT  AMHLDRP  FL+ YLHK++V+V+NTGHHW
Sbjct: 359  PLNITDPATENAMHLDRPPAFLRQYLHKINVLVMNTGHHW 398


>ref|XP_004136111.1| PREDICTED: uncharacterized protein LOC101208929 [Cucumis sativus]
          Length = 395

 Score =  308 bits (788), Expect = 2e-81
 Identities = 145/238 (60%), Positives = 177/238 (74%), Gaps = 3/238 (1%)
 Frame = +2

Query: 305  QSTVNTLEHQPVAEAGHVHDVHSVNSSRSPTSSLEPRKDNKDLTKSP---AQETGCNYAK 475
            + + NT E +   E  H  D    +SS  PT  L+  +D   L+ S    A  + CNYAK
Sbjct: 3    ERSTNTDEKEKPREISHNSDA---DSSSKPTPELKDNEDGVILSPSSKDIAALSVCNYAK 59

Query: 476  GKWVADKKRPLYSGFQCKQWLSSMWACRLMQRKDFSYESFRWQPKDCDMPEFKGSEFLKR 655
            G+WV D +RP YSGF CKQWLS MWACRL +RKDFSYE +RWQP++C MPEF+ S FL+R
Sbjct: 60   GRWVEDNRRPWYSGFGCKQWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFERSSFLRR 119

Query: 656  MQGKTIALVGDSLGRQQFQSLMCMVTGGKENSEVEDIGSEYGLVQEPGAKRPAGWAYRFP 835
            MQ KT+A +GDSLGRQQFQSLMCM+TGG+E+ EVED+G EYGL + PGA RP GW YRFP
Sbjct: 120  MQNKTLAFIGDSLGRQQFQSLMCMLTGGEESPEVEDVGREYGLAKAPGALRPDGWVYRFP 179

Query: 836  STNTTILYYWSASLCELEPLNLTDPATNYAMHLDRPVPFLKYYLHKLDVVVLNTGHHW 1009
            +TNTTILYYWSASL +LEPLN TDP T+ AMHLD+P  F++ + H+  V+VLNTGHHW
Sbjct: 180  NTNTTILYYWSASLSDLEPLNRTDPLTDIAMHLDQPPAFMRKFFHQFHVLVLNTGHHW 237


>ref|NP_568398.1| protein trichome birefringence-like 16 [Arabidopsis thaliana]
            gi|238481331|ref|NP_001154728.1| protein trichome
            birefringence-like 16 [Arabidopsis thaliana]
            gi|332005492|gb|AED92875.1| protein trichome
            birefringence-like 16 [Arabidopsis thaliana]
            gi|332005494|gb|AED92877.1| protein trichome
            birefringence-like 16 [Arabidopsis thaliana]
          Length = 551

 Score =  308 bits (788), Expect = 2e-81
 Identities = 139/243 (57%), Positives = 178/243 (73%), Gaps = 3/243 (1%)
 Frame = +2

Query: 290  SPNGHQSTVNTLEHQ-PVAEAGHVHDVHSVNSSRSPTSSLEPRKDNKDLTKSPAQETG-- 460
            +P      +  ++H+  V E       H   ++  P S++    + +    S A+ T   
Sbjct: 152  TPTREDFKLEKVKHEVAVGEGEATETTHIKETNSDPKSNILATDEERTDGTSTARITNQA 211

Query: 461  CNYAKGKWVADKKRPLYSGFQCKQWLSSMWACRLMQRKDFSYESFRWQPKDCDMPEFKGS 640
            CNYAKGKWV D  RPLYSG QCKQWL+SMWACRLMQR DF++ES RWQPKDC M EF+GS
Sbjct: 212  CNYAKGKWVVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAFESLRWQPKDCSMEEFEGS 271

Query: 641  EFLKRMQGKTIALVGDSLGRQQFQSLMCMVTGGKENSEVEDIGSEYGLVQEPGAKRPAGW 820
            +FL+RM+ KT+A VGDSLGRQQFQS+MCM++GGKE  +V D+G E+G +   G  RP GW
Sbjct: 272  KFLRRMKNKTLAFVGDSLGRQQFQSMMCMISGGKERLDVLDVGPEFGFITPEGGARPGGW 331

Query: 821  AYRFPSTNTTILYYWSASLCELEPLNLTDPATNYAMHLDRPVPFLKYYLHKLDVVVLNTG 1000
            AYRFP TNTT+LY+WS++LC++EPLN+TDPAT +AMHLDRP  FL+ YL K+DV+V+NTG
Sbjct: 332  AYRFPETNTTVLYHWSSTLCDIEPLNITDPATEHAMHLDRPPAFLRQYLQKIDVLVMNTG 391

Query: 1001 HHW 1009
            HHW
Sbjct: 392  HHW 394


Top