BLASTX nr result

ID: Dioscorea21_contig00030157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030157
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869624.1| hypothetical protein ARALYDRAFT_913945 [Arab...    59   5e-07
ref|NP_194347.4| uncharacterized protein [Arabidopsis thaliana] ...    57   2e-06
emb|CAB39682.1| putative transcription factor [Arabidopsis thali...    57   2e-06
gb|AAT00536.1| effector of transcription [Brassica napus]              56   4e-06

>ref|XP_002869624.1| hypothetical protein ARALYDRAFT_913945 [Arabidopsis lyrata subsp.
           lyrata] gi|297315460|gb|EFH45883.1| hypothetical protein
           ARALYDRAFT_913945 [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
 Frame = -2

Query: 268 EVLSSTDNSSLVGLPIEDNSFCMELPCNGTQQC-----EKLREISPTENFNAKDEFADVE 104
           +++  +D++S+ G+ +ED + C   P  G ++C     ++L  +SP ++   +   A   
Sbjct: 193 DIVDGSDSASVCGVLLEDGTTCSTTPIKGRKRCSEHKGKRLSRVSPEKHIPCE---APTV 249

Query: 103 HDLSEVYHICGALLSNGNVCRSKPLQGRKRCEDH 2
            +  E  +ICG +L +   CR+KP+  R+RCEDH
Sbjct: 250 RECEETDNICGVILPDMVRCRTKPVSRRRRCEDH 283


>ref|NP_194347.4| uncharacterized protein [Arabidopsis thaliana]
           gi|332659766|gb|AEE85166.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 506

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
 Frame = -2

Query: 268 EVLSSTDNSSLVGLPIEDNSFCMELPCNGTQQC-----EKLREISPTENFNAKDEFADVE 104
           +++  +D++S  G+ +ED + C   P  G ++C     ++L  +SP  +   +       
Sbjct: 295 DIVDESDSASACGVLLEDGTTCTTTPVKGRKRCTEHKGKRLSRVSPGIHIPCE---VPTV 351

Query: 103 HDLSEVYHICGALLSNGNVCRSKPLQGRKRCEDH 2
            +  E  +ICG +L +   CRSKP+  RKRCEDH
Sbjct: 352 RECEETENICGVILPDMIRCRSKPVSRRKRCEDH 385


>emb|CAB39682.1| putative transcription factor [Arabidopsis thaliana]
           gi|7269468|emb|CAB79472.1| putative transcription factor
           [Arabidopsis thaliana]
          Length = 349

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
 Frame = -2

Query: 268 EVLSSTDNSSLVGLPIEDNSFCMELPCNGTQQC-----EKLREISPTENFNAKDEFADVE 104
           +++  +D++S  G+ +ED + C   P  G ++C     ++L  +SP  +   +       
Sbjct: 138 DIVDESDSASACGVLLEDGTTCTTTPVKGRKRCTEHKGKRLSRVSPGIHIPCE---VPTV 194

Query: 103 HDLSEVYHICGALLSNGNVCRSKPLQGRKRCEDH 2
            +  E  +ICG +L +   CRSKP+  RKRCEDH
Sbjct: 195 RECEETENICGVILPDMIRCRSKPVSRRKRCEDH 228


>gb|AAT00536.1| effector of transcription [Brassica napus]
          Length = 440

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
 Frame = -2

Query: 268 EVLSSTDNSSLVGLPIEDNSFCMELPCNGTQQC-----EKLREISPTENFNAKDEFADVE 104
           +++  +D++S+ G+  ED + C+  P  G ++C     +++    P +N   ++E  +  
Sbjct: 236 DIVDGSDSASVCGVLQEDGTTCLTAPVTGRKRCTEHKGQRITCAPPVKNPPCEEETEE-- 293

Query: 103 HDLSEVYHICGALLSNGNVCRSKPLQGRKRCEDH 2
                   ICG +L     CRSKP+ GRKRCEDH
Sbjct: 294 --------ICGVILPEMVRCRSKPVSGRKRCEDH 319


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