BLASTX nr result

ID: Dioscorea21_contig00030013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030013
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529498.1| ATP binding protein, putative [Ricinus commu...    62   6e-08
ref|XP_002521786.1| Disease resistance protein RPP13, putative [...    56   3e-06
gb|AAL32592.1| disease resistance protein RPP8 [Arabidopsis thal...    54   1e-05
ref|NP_199160.1| disease resistance protein RPP8 [Arabidopsis th...    54   1e-05
ref|XP_002529494.1| conserved hypothetical protein [Ricinus comm...    54   1e-05

>ref|XP_002529498.1| ATP binding protein, putative [Ricinus communis]
            gi|223531056|gb|EEF32908.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1394

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/56 (51%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = -2

Query: 214  LKFLEINGCRRLKMIPEGLKNVP-LEVLQLNSMAEEFKNRIKENTGEDWYKIQHVP 50
            L+ L+I  CR+LKM+PEGL+++  L+VL++  M  EF +RI+EN G DWYKI ++P
Sbjct: 1334 LRELQIISCRQLKMLPEGLEHMTSLKVLKVREMPSEFTSRIQENHGLDWYKIANIP 1389


>ref|XP_002521786.1| Disease resistance protein RPP13, putative [Ricinus communis]
            gi|223538999|gb|EEF40596.1| Disease resistance protein
            RPP13, putative [Ricinus communis]
          Length = 929

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/55 (43%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = -2

Query: 205  LEINGCRRLKMIPEGLKNVP-LEVLQLNSMAEEFKNRIKENTGEDWYKIQHVPNI 44
            LEI+ C  +KM+P+GL+ +  L+ +++ SM + FK R++E  G+D+YK+QHVP++
Sbjct: 869  LEISNCTSMKMVPDGLRFITCLQEMEIRSMLKAFKTRLEEG-GDDYYKVQHVPSV 922


>gb|AAL32592.1| disease resistance protein RPP8 [Arabidopsis thaliana]
          Length = 908

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 24/59 (40%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = -2

Query: 217  CLKFLEINGCRRLKMIPEGLKNV-PLEVLQLNSMAEEFKNRIKENTGEDWYKIQHVPNI 44
            CL+ L I+ C++LK +P+GLK +  L+ L++  M  E+K ++    GED+YK+QH+P++
Sbjct: 844  CLRTLTIDDCKKLKELPDGLKYITSLKELKIEGMKREWKEKLVPG-GEDYYKVQHIPDV 901


>ref|NP_199160.1| disease resistance protein RPP8 [Arabidopsis thaliana]
            gi|30694301|ref|NP_851124.1| disease resistance protein
            RPP8 [Arabidopsis thaliana]
            gi|29839585|sp|Q8W4J9.2|RPP8_ARATH RecName: Full=Disease
            resistance protein RPP8; AltName: Full=Resistance to
            Peronospora parasitica protein 8
            gi|3901294|gb|AAC78631.1| rpp8 [Arabidopsis thaliana]
            gi|8843900|dbj|BAA97426.1| disease resistance protein
            RPP8 [Arabidopsis thaliana] gi|332007584|gb|AED94967.1|
            disease resistance protein RPP8 [Arabidopsis thaliana]
            gi|332007585|gb|AED94968.1| disease resistance protein
            RPP8 [Arabidopsis thaliana]
          Length = 908

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 24/59 (40%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = -2

Query: 217  CLKFLEINGCRRLKMIPEGLKNV-PLEVLQLNSMAEEFKNRIKENTGEDWYKIQHVPNI 44
            CL+ L I+ C++LK +P+GLK +  L+ L++  M  E+K ++    GED+YK+QH+P++
Sbjct: 844  CLRTLTIDDCKKLKELPDGLKYITSLKELKIEGMKREWKEKLVPG-GEDYYKVQHIPDV 901


>ref|XP_002529494.1| conserved hypothetical protein [Ricinus communis]
            gi|223531052|gb|EEF32904.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1115

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -2

Query: 214  LKFLEINGCRRLKMIPEGLKNVP-LEVLQLNSMAEEFKNRIKENTGEDWYKIQHVPNISI 38
            LK LEI  CR L M+P+GL++V  L  L+L +M      RIK+N GEDW K+ H+ NI I
Sbjct: 1055 LKCLEIRSCRNLGMLPDGLQHVKTLSKLKLTNMPM-LSARIKDNEGEDWDKVAHILNIYI 1113

Query: 37   K 35
            +
Sbjct: 1114 E 1114


Top