BLASTX nr result

ID: Dioscorea21_contig00030000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00030000
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW78099.1| hypothetical protein ZEAMMB73_210609 [Zea mays]        107   8e-22
ref|XP_003566197.1| PREDICTED: UPF0503 protein At3g09070, chloro...   106   2e-21
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...   104   6e-21
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro...   104   6e-21

>gb|AFW78099.1| hypothetical protein ZEAMMB73_210609 [Zea mays]
          Length = 660

 Score =  107 bits (268), Expect = 8e-22
 Identities = 66/143 (46%), Positives = 80/143 (55%), Gaps = 19/143 (13%)
 Frame = -3

Query: 439 RRVPSACDRHPDELVTGFCASCLRERLAGLEIRRNXXXXXXXXS----AFKSLFVK---- 284
           R V + CD HP E  TGFCA+CLRERLAGLE                 A +SLF +    
Sbjct: 14  RSVSTTCDLHPGETFTGFCAACLRERLAGLESTGGSAAAAAPGRRSTSAIRSLFTRPFAA 73

Query: 283 SNPNAP----------LRRCKSFSCSRR-DGIAASFEPQRKSCDVRGRSTLWSLFNQDDQ 137
           +   AP          LRRCKSFSC R  D +AA+ EPQR+SCDVRGRSTLW+LF+QDD+
Sbjct: 74  AAGGAPSGSGAAALPDLRRCKSFSCGRGGDALAAAGEPQRRSCDVRGRSTLWALFHQDDR 133

Query: 136 LKEPGRDSFGAAGIENEAGCPNL 68
            +     +FGA    + A    L
Sbjct: 134 QRVRDGTAFGAFPASSSAAAAAL 156


>ref|XP_003566197.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like
           [Brachypodium distachyon]
          Length = 641

 Score =  106 bits (264), Expect = 2e-21
 Identities = 67/140 (47%), Positives = 78/140 (55%), Gaps = 16/140 (11%)
 Frame = -3

Query: 439 RRVPSACDRHPDELVTGFCASCLRERLAGLEIRRNXXXXXXXXS--AFKSLFVKSNPNAP 266
           R V ++CD HPDE  TGFC +CLRERLAGLE            S  A +SLF +    AP
Sbjct: 14  RSVSTSCDLHPDENFTGFCTACLRERLAGLEATAAAAAAPGRKSTSAIRSLFSRPFAAAP 73

Query: 265 -----------LRRCKSFSCSRRDGIAASFEPQRKSCDVRGRS---TLWSLFNQDDQLKE 128
                      LRRCKSFSC R    AA  EPQR+SCDVRGRS   TLWSLF+QDD+ + 
Sbjct: 74  SGSGSGAAPPDLRRCKSFSCGRGGAGAAVDEPQRRSCDVRGRSTTTTLWSLFHQDDRERV 133

Query: 127 PGRDSFGAAGIENEAGCPNL 68
               +FGA    + A    L
Sbjct: 134 RDGTAFGAFPASSSAAAAAL 153


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  105 bits (261), Expect = 5e-21
 Identities = 65/165 (39%), Positives = 88/165 (53%), Gaps = 20/165 (12%)
 Frame = -3

Query: 436 RVPSACDRHPDELVTGFCASCLRERLAGLE------IRRNXXXXXXXXSAFKSLFVKSNP 275
           R  ++CDRHP+E  TGFC SCL ERLA L+         +        +A K++F    P
Sbjct: 15  RPSTSCDRHPEEHFTGFCPSCLCERLAVLDPNTSSAASSSSSRKPTATAALKAIFKPPQP 74

Query: 274 NAP--------------LRRCKSFSCSRRDGIAASFEPQRKSCDVRGRSTLWSLFNQDDQ 137
           ++               LRR KSFS S+ +G +  FEPQRKSCDVR R+TLWSLFNQD +
Sbjct: 75  SSSNNNNNSSKSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRNTLWSLFNQDSE 134

Query: 136 LKEPGRDSFGAAGIENEAGCPNLGVPSSGIADPVHESREDDDDED 2
                +      G E EA  P   +  S +  PV ES+E+++ E+
Sbjct: 135 RNPSVKKEPFKGGPEIEAVEPR--ISCSSVRGPVFESKEEEEIEN 177


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score =  104 bits (260), Expect = 6e-21
 Identities = 72/177 (40%), Positives = 91/177 (51%), Gaps = 32/177 (18%)
 Frame = -3

Query: 436 RVPSACDRHPDELVTGFCASCLRERLAGLE----------IRRNXXXXXXXXSAFKSLFV 287
           R  ++CDRHP+E  TGFC SCL ERLA LE           R+         +A K++F 
Sbjct: 17  RPSTSCDRHPEERFTGFCPSCLCERLAVLEPSTSSSSSTSSRKPPINSSAAAAALKAIFR 76

Query: 286 KSNPNA----------------PLRRCKSFSCSRRDGIAASFEPQRKSCDVRGRSTLWSL 155
            S   A                 LRR KSFS S+ +G +  FEPQRKSCDVR R+TLW+L
Sbjct: 77  PSATGAGPGGLSGRNKPSSFLPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRNTLWTL 136

Query: 154 FNQDDQ----LKEPGRDSFGAAG--IENEAGCPNLGVPSSGIADPVHESREDDDDED 2
           F QDD+      E  R S  AAG  IE+E     L   SS +  PV E  ++ +D+D
Sbjct: 137 FTQDDERNPLKNEAPRVSNAAAGLHIEDERDPRILAAASSLVRGPVLEPDDEGEDDD 193


>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 655

 Score =  104 bits (260), Expect = 6e-21
 Identities = 72/177 (40%), Positives = 91/177 (51%), Gaps = 32/177 (18%)
 Frame = -3

Query: 436 RVPSACDRHPDELVTGFCASCLRERLAGLE----------IRRNXXXXXXXXSAFKSLFV 287
           R  ++CDRHP+E  TGFC SCL ERLA LE           R+         +A K++F 
Sbjct: 17  RPSTSCDRHPEERFTGFCPSCLCERLAVLEPSTSSSSSTSSRKPPINSSAAAAALKAIFR 76

Query: 286 KSNPNA----------------PLRRCKSFSCSRRDGIAASFEPQRKSCDVRGRSTLWSL 155
            S   A                 LRR KSFS S+ +G +  FEPQRKSCDVR R+TLW+L
Sbjct: 77  PSATGAGPGGLSGRNKPSSFLPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRNTLWTL 136

Query: 154 FNQDDQ----LKEPGRDSFGAAG--IENEAGCPNLGVPSSGIADPVHESREDDDDED 2
           F QDD+      E  R S  AAG  IE+E     L   SS +  PV E  ++ +D+D
Sbjct: 137 FTQDDERNPLKNEAPRVSNAAAGLHIEDERDPRILAAASSLVRGPVLEPDDEGEDDD 193


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