BLASTX nr result

ID: Dioscorea21_contig00029475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029475
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17218.3| unnamed protein product [Vitis vinifera]              112   3e-23
ref|XP_002273132.1| PREDICTED: actin-related protein 2/3 complex...   112   3e-23
gb|AAO73272.1| putative ARP2/3 complex 20 kDa subunit, 3'-partia...   110   1e-22
ref|NP_001051892.1| Os03g0848300 [Oryza sativa Japonica Group] g...   110   1e-22
ref|XP_003562343.1| PREDICTED: actin-related protein 2/3 complex...   110   1e-22

>emb|CBI17218.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = +1

Query: 1   RRKPVQGYDLSFLITNYHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 162
           RRKPVQGYD+SFLITNYHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGR
Sbjct: 130 RRKPVQGYDISFLITNYHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 183


>ref|XP_002273132.1| PREDICTED: actin-related protein 2/3 complex subunit 4-like [Vitis
           vinifera]
          Length = 169

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = +1

Query: 1   RRKPVQGYDLSFLITNYHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 162
           RRKPVQGYD+SFLITNYHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGR
Sbjct: 105 RRKPVQGYDISFLITNYHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 158


>gb|AAO73272.1| putative ARP2/3 complex 20 kDa subunit, 3'-partial [Oryza sativa
           Japonica Group]
          Length = 164

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/54 (96%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   RRKPVQGYDLSFLITNYHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 162
           RRKPVQGYD+SFLITNYHCEDM KHKLIDFIVQFMEDIDKEISELKLSVNTRGR
Sbjct: 105 RRKPVQGYDISFLITNYHCEDMHKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 158


>ref|NP_001051892.1| Os03g0848300 [Oryza sativa Japonica Group]
           gi|28269392|gb|AAO37935.1| putative actin-related
           complex protein [Oryza sativa Japonica Group]
           gi|108712098|gb|ABF99893.1| Actin-related protein 2/3
           complex subunit 4, putative, expressed [Oryza sativa
           Japonica Group] gi|113550363|dbj|BAF13806.1|
           Os03g0848300 [Oryza sativa Japonica Group]
           gi|125546442|gb|EAY92581.1| hypothetical protein
           OsI_14322 [Oryza sativa Indica Group]
           gi|125588638|gb|EAZ29302.1| hypothetical protein
           OsJ_13363 [Oryza sativa Japonica Group]
           gi|149390857|gb|ABR25446.1| actin-related protein 2/3
           complex subunit 4 [Oryza sativa Indica Group]
          Length = 169

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/54 (96%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   RRKPVQGYDLSFLITNYHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 162
           RRKPVQGYD+SFLITNYHCEDM KHKLIDFIVQFMEDIDKEISELKLSVNTRGR
Sbjct: 105 RRKPVQGYDISFLITNYHCEDMHKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 158


>ref|XP_003562343.1| PREDICTED: actin-related protein 2/3 complex subunit 4-like
           [Brachypodium distachyon]
          Length = 169

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/54 (96%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   RRKPVQGYDLSFLITNYHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 162
           RRKPVQGYD+SFLITNYHCEDM KHKLIDFIVQFMEDIDKEISELKLSVNTRGR
Sbjct: 105 RRKPVQGYDISFLITNYHCEDMHKHKLIDFIVQFMEDIDKEISELKLSVNTRGR 158


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