BLASTX nr result

ID: Dioscorea21_contig00029473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029473
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransfe...    40   8e-07
ref|NP_189354.2| S-adenosylmethionine-dependent methyltransferas...    41   1e-06
ref|XP_002877022.1| hypothetical protein ARALYDRAFT_904929 [Arab...    41   1e-06
dbj|BAB01935.1| unnamed protein product [Arabidopsis thaliana]         41   1e-06

>ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like
           [Cucumis sativus]
          Length = 519

 Score = 39.7 bits (91), Expect(2) = 8e-07
 Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -3

Query: 240 GMTCCAKLII*ASPDSLLIGLCQEGCHNIVDIP-CK 136
           G  C AKL +  S  S +IGL QEG HN+VDIP CK
Sbjct: 105 GWRCRAKLAVRGSSISPMIGLYQEGTHNVVDIPDCK 140



 Score = 38.1 bits (87), Expect(2) = 8e-07
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 356 CWSCLHELALDWSSVLQEVSNFFEDHEAWDFNFESSLLWG 237
           C  C HE  L    +++E + FF D    DF F+S  LWG
Sbjct: 66  CSGCTHEFDLHRPVIVEEATQFFNDLGVLDFTFDSCKLWG 105


>ref|NP_189354.2| S-adenosylmethionine-dependent methyltransferase-domain containing
           protein [Arabidopsis thaliana]
           gi|190341123|gb|ACE74720.1| At3g27180 [Arabidopsis
           thaliana] gi|332643755|gb|AEE77276.1|
           S-adenosylmethionine-dependent methyltransferase-domain
           containing protein [Arabidopsis thaliana]
          Length = 518

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -3

Query: 240 GMTCCAKLII*ASPDSLLIGLCQEGCHNIVDIP-CK 136
           G  C AKL +  S D+ LIGL QEG H +VDIP CK
Sbjct: 95  GWRCRAKLAVRGSSDNALIGLYQEGTHTVVDIPECK 130



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 356 CWSCLHELALDWSSVLQEVSNFFEDHEAWDFNFESSLLWG 237
           C  C  E  L   +V+ E S+FF+ +   DF F+S  LWG
Sbjct: 56  CSGCTQEFNLHRPAVVDEASDFFKRYGVDDFTFDSCRLWG 95


>ref|XP_002877022.1| hypothetical protein ARALYDRAFT_904929 [Arabidopsis lyrata subsp.
           lyrata] gi|297322860|gb|EFH53281.1| hypothetical protein
           ARALYDRAFT_904929 [Arabidopsis lyrata subsp. lyrata]
          Length = 512

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -3

Query: 240 GMTCCAKLII*ASPDSLLIGLCQEGCHNIVDIP-CK 136
           G  C AKL +  S D+ LIGL QEG H +VDIP CK
Sbjct: 94  GWRCRAKLAVRGSSDNALIGLYQEGTHTVVDIPECK 129



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 356 CWSCLHELALDWSSVLQEVSNFFEDHEAWDFNFESSLLWG 237
           C  C  E  L   +V+ E S FF+ +   DF F+S  LWG
Sbjct: 55  CSGCTQEFNLHRPAVVDEASGFFKRYGVEDFTFDSCRLWG 94


>dbj|BAB01935.1| unnamed protein product [Arabidopsis thaliana]
          Length = 511

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -3

Query: 240 GMTCCAKLII*ASPDSLLIGLCQEGCHNIVDIP-CK 136
           G  C AKL +  S D+ LIGL QEG H +VDIP CK
Sbjct: 94  GWRCRAKLAVRGSSDNALIGLYQEGTHTVVDIPECK 129



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 356 CWSCLHELALDWSSVLQEVSNFFEDHEAWDFNFESSLLWG 237
           C  C  E  L   +V+ E S+FF+ +   DF F+S  LWG
Sbjct: 55  CSGCTQEFNLHRPAVVDEASDFFKRYGVDDFTFDSCRLWG 94


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