BLASTX nr result

ID: Dioscorea21_contig00029458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029458
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homo...   253   1e-65
ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216...   253   1e-65
emb|CBI24224.3| unnamed protein product [Vitis vinifera]              246   1e-63
ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo...   246   1e-63
ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-62

>ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homolog [Cucumis sativus]
          Length = 588

 Score =  253 bits (645), Expect = 1e-65
 Identities = 114/165 (69%), Positives = 142/165 (86%)
 Frame = -3

Query: 496 FFLLRINPEMETELRFLLSLVKWGNQKRYQVWFAKKHLSLPGSETVMVDIVRFICCAHHP 317
           +FLLRI+PEME +LRFL++ VK G+Q RYQ+WFAKK L  P SET++ DIVRFICCAHHP
Sbjct: 264 YFLLRISPEMEAQLRFLMTNVKLGSQNRYQIWFAKKFLHGPESETIISDIVRFICCAHHP 323

Query: 316 SNEIIQSSVIPRWAIIGWLLKCCRRNYFQANLKLALFYDWLFYDEKHDNIMNIEPAILLI 137
            NE+IQS +IPRWA+IGWLL CCR+NY +AN+KLALFYDWLF+D+K D IMNIEPA+LL+
Sbjct: 324 PNEVIQSDIIPRWAVIGWLLTCCRKNYIKANVKLALFYDWLFFDDKTDKIMNIEPAMLLM 383

Query: 136 LNSVPKYVDITHTLLEFLFLLVDNYDVNRREMIARCVSTSFGLLL 2
           + S+P+Y+DI HTLLEFLFLLVDNYDV R++ IA  VS++F  L+
Sbjct: 384 VFSIPRYIDIVHTLLEFLFLLVDNYDVQRKDKIALGVSSAFSALI 428


>ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216642 [Cucumis sativus]
          Length = 1058

 Score =  253 bits (645), Expect = 1e-65
 Identities = 114/165 (69%), Positives = 142/165 (86%)
 Frame = -3

Query: 496 FFLLRINPEMETELRFLLSLVKWGNQKRYQVWFAKKHLSLPGSETVMVDIVRFICCAHHP 317
           +FLLRI+PEME +LRFL++ VK G+Q RYQ+WFAKK L  P SET++ DIVRFICCAHHP
Sbjct: 264 YFLLRISPEMEAQLRFLMTNVKLGSQNRYQIWFAKKFLHGPESETIISDIVRFICCAHHP 323

Query: 316 SNEIIQSSVIPRWAIIGWLLKCCRRNYFQANLKLALFYDWLFYDEKHDNIMNIEPAILLI 137
            NE+IQS +IPRWA+IGWLL CCR+NY +AN+KLALFYDWLF+D+K D IMNIEPA+LL+
Sbjct: 324 PNEVIQSDIIPRWAVIGWLLTCCRKNYIKANVKLALFYDWLFFDDKTDKIMNIEPAMLLM 383

Query: 136 LNSVPKYVDITHTLLEFLFLLVDNYDVNRREMIARCVSTSFGLLL 2
           + S+P+Y+DI HTLLEFLFLLVDNYDV R++ IA  VS++F  L+
Sbjct: 384 VFSIPRYIDIVHTLLEFLFLLVDNYDVQRKDKIALGVSSAFSALI 428


>emb|CBI24224.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  246 bits (628), Expect = 1e-63
 Identities = 112/165 (67%), Positives = 143/165 (86%)
 Frame = -3

Query: 496 FFLLRINPEMETELRFLLSLVKWGNQKRYQVWFAKKHLSLPGSETVMVDIVRFICCAHHP 317
           +FLLRI PEME++LRFLL+ VK G+QKR+Q WF +K L     ET++ DIVRFICC HHP
Sbjct: 150 YFLLRITPEMESQLRFLLTHVKLGSQKRHQAWFMRKFLCGSERETLICDIVRFICCGHHP 209

Query: 316 SNEIIQSSVIPRWAIIGWLLKCCRRNYFQANLKLALFYDWLFYDEKHDNIMNIEPAILLI 137
           SN+IIQS V+PRWA+IGWLLK CR++Y +AN+KLALFYDWLF+DE+ DNIMNIEPA+LL+
Sbjct: 210 SNDIIQSDVMPRWAVIGWLLKSCRKSYVEANVKLALFYDWLFFDERIDNIMNIEPAMLLM 269

Query: 136 LNSVPKYVDITHTLLEFLFLLVDNYDVNRREMIARCVSTSFGLLL 2
           +NSVPKYVD+THTLLEFL LLVDNYD+ R+++I R V+++F +L+
Sbjct: 270 VNSVPKYVDMTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLV 314


>ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera]
          Length = 928

 Score =  246 bits (628), Expect = 1e-63
 Identities = 112/165 (67%), Positives = 143/165 (86%)
 Frame = -3

Query: 496 FFLLRINPEMETELRFLLSLVKWGNQKRYQVWFAKKHLSLPGSETVMVDIVRFICCAHHP 317
           +FLLRI PEME++LRFLL+ VK G+QKR+Q WF +K L     ET++ DIVRFICC HHP
Sbjct: 250 YFLLRITPEMESQLRFLLTHVKLGSQKRHQAWFMRKFLCGSERETLICDIVRFICCGHHP 309

Query: 316 SNEIIQSSVIPRWAIIGWLLKCCRRNYFQANLKLALFYDWLFYDEKHDNIMNIEPAILLI 137
           SN+IIQS V+PRWA+IGWLLK CR++Y +AN+KLALFYDWLF+DE+ DNIMNIEPA+LL+
Sbjct: 310 SNDIIQSDVMPRWAVIGWLLKSCRKSYVEANVKLALFYDWLFFDERIDNIMNIEPAMLLM 369

Query: 136 LNSVPKYVDITHTLLEFLFLLVDNYDVNRREMIARCVSTSFGLLL 2
           +NSVPKYVD+THTLLEFL LLVDNYD+ R+++I R V+++F +L+
Sbjct: 370 VNSVPKYVDMTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLV 414


>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score =  242 bits (618), Expect = 2e-62
 Identities = 111/165 (67%), Positives = 139/165 (84%)
 Frame = -3

Query: 496 FFLLRINPEMETELRFLLSLVKWGNQKRYQVWFAKKHLSLPGSETVMVDIVRFICCAHHP 317
           +FLLRI PEMET+LRFLL  VK+GNQKRYQVWFAKK L     ET++VDI+RFICCAHHP
Sbjct: 265 YFLLRITPEMETQLRFLLMHVKFGNQKRYQVWFAKKFLFGQERETLVVDIIRFICCAHHP 324

Query: 316 SNEIIQSSVIPRWAIIGWLLKCCRRNYFQANLKLALFYDWLFYDEKHDNIMNIEPAILLI 137
           SNEIIQS ++PRWA+IGWLLK CR  Y +AN+KLALFYDWLF+DEK DNIMNIEPA+LL+
Sbjct: 325 SNEIIQSDIVPRWAVIGWLLKSCREKYVEANMKLALFYDWLFFDEKIDNIMNIEPAMLLM 384

Query: 136 LNSVPKYVDITHTLLEFLFLLVDNYDVNRREMIARCVSTSFGLLL 2
           + S+PKY+DITH+LLEFL  + +NY+ +R  +I R +S++  +L+
Sbjct: 385 VCSIPKYIDITHSLLEFLLFIAENYEEDRNYVIRRGLSSAMRMLV 429


Top