BLASTX nr result

ID: Dioscorea21_contig00029457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029457
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18449.3| unnamed protein product [Vitis vinifera]              205   3e-51
ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835...   178   5e-43
ref|XP_002513311.1| splicing endonuclease positive effector sen1...   177   1e-42
ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arab...   152   3e-35
gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p...   152   4e-35

>emb|CBI18449.3| unnamed protein product [Vitis vinifera]
          Length = 2154

 Score =  205 bits (522), Expect = 3e-51
 Identities = 101/178 (56%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
 Frame = +2

Query: 2    SFCKAVFWVMSHISVIEANLSLEFSMPISKWLSQYAPEISSSFGWEVPQGYDDGSDGKES 181
            S  KAVFW  S  +++E   + E  +P+  WLS  A EISSSFGW+VP G DDG DGKES
Sbjct: 623  SVSKAVFWARSRFALVEPEKNAEMEVPVKNWLSFSAKEISSSFGWKVPTGSDDGGDGKES 682

Query: 182  RNSIKVSSMQSPLARTLKRFAAEFIIQMEKRELHKQWTWEPEMAECLILLLIDPNENIRQ 361
            +NS+KVS+M  PL RT KR  A +I+QME+ EL KQW WEP M E LILLL++PN+N+RQ
Sbjct: 683  QNSMKVSTMCIPLIRTFKRLTAHYIVQMEQEELRKQWIWEPRMGESLILLLLEPNDNVRQ 742

Query: 362  IDRVVLEHISKTRGLTPGLQFLCSSATSLSAVYLGLRHALEKVQADSVSANF---HNF 526
            + + +LE +S  RGL   LQFLCS   S+SA Y GLRHAL  VQ DSV  NF   H+F
Sbjct: 743  VGKCLLEQVSNMRGLAHCLQFLCSCTLSMSATYNGLRHALRLVQVDSVLLNFETLHHF 800


>ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835663 [Brachypodium
           distachyon]
          Length = 2045

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/158 (53%), Positives = 116/158 (73%)
 Frame = +2

Query: 50  EANLSLEFSMPISKWLSQYAPEISSSFGWEVPQGYDDGSDGKESRNSIKVSSMQSPLART 229
           +  L+ E S+P++ WL  +A E+S +F W+VP G DDG  GK+  N++KVS   + L R 
Sbjct: 284 DPGLATESSVPVNDWLLSHAGEVSPTFSWQVPNGADDGGGGKDCINTVKVSKFGTLLLRI 343

Query: 230 LKRFAAEFIIQMEKRELHKQWTWEPEMAECLILLLIDPNENIRQIDRVVLEHISKTRGLT 409
            KRFA  FI+Q+E+  L KQWTWE  MAE LIL L+D N+N+RQ  R V+EH+S+ RGLT
Sbjct: 344 FKRFAIHFIMQIEQCGLQKQWTWESMMAESLILALVDHNDNVRQAGRAVMEHVSQARGLT 403

Query: 410 PGLQFLCSSATSLSAVYLGLRHALEKVQADSVSANFHN 523
            GLQFLCSSA+SLSAV++GLR+ ++ V++ SV A+FH+
Sbjct: 404 SGLQFLCSSASSLSAVFVGLRYVVQLVESQSVLADFHS 441


>ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
           communis] gi|223547219|gb|EEF48714.1| splicing
           endonuclease positive effector sen1, putative [Ricinus
           communis]
          Length = 2110

 Score =  177 bits (448), Expect = 1e-42
 Identities = 85/146 (58%), Positives = 107/146 (73%)
 Frame = +2

Query: 77  MPISKWLSQYAPEISSSFGWEVPQGYDDGSDGKESRNSIKVSSMQSPLARTLKRFAAEFI 256
           + +  WLS  A EIS+SFGW+VP G+DDG  GKES+NS++VS M  PL RT  R  A F+
Sbjct: 381 LAVRPWLSSSATEISTSFGWKVPTGFDDGGGGKESKNSLRVSMMHLPLIRTFNRLTAHFL 440

Query: 257 IQMEKRELHKQWTWEPEMAECLILLLIDPNENIRQIDRVVLEHISKTRGLTPGLQFLCSS 436
           +QM + EL KQWTWEP MAE LIL L DPN+++RQ+ + +LE +S TRGL  GL+FLCSS
Sbjct: 441 VQMGQGELRKQWTWEPGMAESLILSLFDPNDSVRQVGKCLLEQVSNTRGLACGLEFLCSS 500

Query: 437 ATSLSAVYLGLRHALEKVQADSVSAN 514
            +SLSA Y GLRHAL KV +D +  N
Sbjct: 501 GSSLSATYSGLRHAL-KVVSDQILLN 525


>ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
           lyrata] gi|297338763|gb|EFH69180.1| hypothetical protein
           ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata]
          Length = 2129

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/163 (46%), Positives = 104/163 (63%)
 Frame = +2

Query: 2   SFCKAVFWVMSHISVIEANLSLEFSMPISKWLSQYAPEISSSFGWEVPQGYDDGSDGKES 181
           S  +AVFW  S   ++E+  + E ++ I  WLS  A EI  + GW+V  G DDG  GKES
Sbjct: 422 SLSQAVFWARSRFCLVESEKNDEMTVDIETWLSSSAVEIKGTLGWKVATGSDDGGPGKES 481

Query: 182 RNSIKVSSMQSPLARTLKRFAAEFIIQMEKRELHKQWTWEPEMAECLILLLIDPNENIRQ 361
           +NS+ VS M   L RTLKR    +++QM + E  KQWTW P M E  IL L DP++N+RQ
Sbjct: 482 KNSVTVSKMCLTLIRTLKRLTTCYLVQMGE-ECRKQWTWVPGMGETFILSLSDPDDNVRQ 540

Query: 362 IDRVVLEHISKTRGLTPGLQFLCSSATSLSAVYLGLRHALEKV 490
             + +LEH+S TRGL+ GL+FLCS  + L  V  G+RH L+++
Sbjct: 541 FGKSMLEHVSNTRGLSCGLKFLCSQTSHLLFVSSGVRHVLQQL 583


>gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
           [Arabidopsis thaliana]
          Length = 2142

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/163 (46%), Positives = 104/163 (63%)
 Frame = +2

Query: 2   SFCKAVFWVMSHISVIEANLSLEFSMPISKWLSQYAPEISSSFGWEVPQGYDDGSDGKES 181
           S  +AVFW  S   ++E+  + E ++ I  WLS  A EI  + GW+V  G DDG  GKES
Sbjct: 422 SLSQAVFWSRSRFCLVESEKNDEMTVDIETWLSSSAVEIKGTLGWKVATGSDDGGPGKES 481

Query: 182 RNSIKVSSMQSPLARTLKRFAAEFIIQMEKRELHKQWTWEPEMAECLILLLIDPNENIRQ 361
           +NS+ VS M   L RTLKR    +++Q+   E  KQWTW PEM E  IL L DP++N+RQ
Sbjct: 482 KNSVTVSKMCLTLIRTLKRLTTCYLVQIGD-ECRKQWTWVPEMGETFILSLSDPDDNVRQ 540

Query: 362 IDRVVLEHISKTRGLTPGLQFLCSSATSLSAVYLGLRHALEKV 490
             + +LEH+S TRGL+ GL+FLCS  + L  V  G+RH L+++
Sbjct: 541 FGKSMLEHVSNTRGLSCGLKFLCSQTSHLLFVSSGVRHVLQQL 583


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