BLASTX nr result

ID: Dioscorea21_contig00029448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029448
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO35699.1| hypothetical protein [Amblyomma maculatum]             104   1e-37
ref|XP_002266561.1| PREDICTED: protein cornichon homolog 4 [Viti...   100   1e-35
ref|XP_004147951.1| PREDICTED: probable protein cornichon homolo...    93   3e-34
ref|NP_172701.2| protein cornichon-4 [Arabidopsis thaliana] gi|7...    95   1e-33
ref|XP_002889932.1| cornichon family protein [Arabidopsis lyrata...    93   5e-33

>gb|AEO35699.1| hypothetical protein [Amblyomma maculatum]
          Length = 137

 Score =  104 bits (259), Expect(2) = 1e-37
 Identities = 49/65 (75%), Positives = 54/65 (83%)
 Frame = -3

Query: 441 YQLMCLADLEFDYINPYDSASRINYLVVPEFILQGVXXXXXXXSGHWFMFLFSTPVLYYN 262
           YQLMCLADLEFDYINPYDSASRIN +V+PEF LQGV       SG W+MFLF TPVLYYN
Sbjct: 24  YQLMCLADLEFDYINPYDSASRINSVVLPEFALQGVLCLLFLLSGRWWMFLFCTPVLYYN 83

Query: 261 VKLYQ 247
           V++YQ
Sbjct: 84  VRMYQ 88



 Score = 77.8 bits (190), Expect(2) = 1e-37
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = -2

Query: 244 QHHLIDVTEIFNLLNREKKRRLFKLAYLVILLFLSFFWMIWSVLEDE 104
           +HHL+DVTEIFN LN+EKK RL KL + VILLFL+ FWMIWSVLED+
Sbjct: 90  RHHLVDVTEIFNHLNKEKKSRLIKLVFHVILLFLALFWMIWSVLEDD 136


>ref|XP_002266561.1| PREDICTED: protein cornichon homolog 4 [Vitis vinifera]
           gi|297742670|emb|CBI34819.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  100 bits (248), Expect(2) = 1e-35
 Identities = 47/65 (72%), Positives = 51/65 (78%)
 Frame = -3

Query: 441 YQLMCLADLEFDYINPYDSASRINYLVVPEFILQGVXXXXXXXSGHWFMFLFSTPVLYYN 262
           YQLMCLADLEFDYINPYDSASRIN +V+PEFI QGV       +GHWFM L   P LYYN
Sbjct: 23  YQLMCLADLEFDYINPYDSASRINKVVLPEFITQGVLCLFYSLTGHWFMSLLCGPYLYYN 82

Query: 261 VKLYQ 247
           V+LYQ
Sbjct: 83  VRLYQ 87



 Score = 75.1 bits (183), Expect(2) = 1e-35
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = -2

Query: 244 QHHLIDVTEIFNLLNREKKRRLFKLAYLVILLFLSFFWMIWSVLED 107
           + HLIDVTEIFNLLN EKK+RLFKL YL+ LLFLS FWMI S LED
Sbjct: 89  RQHLIDVTEIFNLLNWEKKQRLFKLGYLIFLLFLSIFWMILSALED 134


>ref|XP_004147951.1| PREDICTED: probable protein cornichon homolog 2-like isoform 1
           [Cucumis sativus] gi|449494293|ref|XP_004159504.1|
           PREDICTED: probable protein cornichon homolog 2-like
           isoform 1 [Cucumis sativus]
          Length = 136

 Score = 92.8 bits (229), Expect(2) = 3e-34
 Identities = 42/64 (65%), Positives = 50/64 (78%)
 Frame = -3

Query: 441 YQLMCLADLEFDYINPYDSASRINYLVVPEFILQGVXXXXXXXSGHWFMFLFSTPVLYYN 262
           YQLMCLADLEFDYINP+DSASRIN +++PEFI+ GV       +GHW M L S P +YYN
Sbjct: 23  YQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIYYN 82

Query: 261 VKLY 250
           V+LY
Sbjct: 83  VRLY 86



 Score = 77.8 bits (190), Expect(2) = 3e-34
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -2

Query: 244 QHHLIDVTEIFNLLNREKKRRLFKLAYLVILLFLSFFWMIWSVLEDE 104
           + HLIDVTEIFN+LN EKK+RLFKLAYLV+LLFLS FWMI+  LED+
Sbjct: 89  RQHLIDVTEIFNMLNWEKKQRLFKLAYLVVLLFLSIFWMIYHALEDD 135


>ref|NP_172701.2| protein cornichon-4 [Arabidopsis thaliana]
           gi|75148636|sp|Q84W04.1|CNIH4_ARATH RecName:
           Full=Protein cornichon homolog 4
           gi|28416577|gb|AAO42819.1| At1g12390 [Arabidopsis
           thaliana] gi|110743211|dbj|BAE99496.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332190753|gb|AEE28874.1| protein cornichon-4
           [Arabidopsis thaliana]
          Length = 137

 Score = 94.7 bits (234), Expect(2) = 1e-33
 Identities = 44/64 (68%), Positives = 49/64 (76%)
 Frame = -3

Query: 441 YQLMCLADLEFDYINPYDSASRINYLVVPEFILQGVXXXXXXXSGHWFMFLFSTPVLYYN 262
           YQL+CLADLEFDYINPYDSASRIN +V+PEFI+QGV       +GHWFM L   P LYYN
Sbjct: 23  YQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYN 82

Query: 261 VKLY 250
             LY
Sbjct: 83  FHLY 86



 Score = 73.9 bits (180), Expect(2) = 1e-33
 Identities = 33/47 (70%), Positives = 42/47 (89%)
 Frame = -2

Query: 247 EQHHLIDVTEIFNLLNREKKRRLFKLAYLVILLFLSFFWMIWSVLED 107
           ++ HL+DVTEIFNLLN EKK+RLFKLAY+V+ LFL+ FWMI+S L+D
Sbjct: 88  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDD 134


>ref|XP_002889932.1| cornichon family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335774|gb|EFH66191.1| cornichon family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score = 92.8 bits (229), Expect(2) = 5e-33
 Identities = 43/64 (67%), Positives = 49/64 (76%)
 Frame = -3

Query: 441 YQLMCLADLEFDYINPYDSASRINYLVVPEFILQGVXXXXXXXSGHWFMFLFSTPVLYYN 262
           YQL+CLADLEFDYINPYDSASRIN +V+PEFI+QGV       +GHW M L   P LYYN
Sbjct: 23  YQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWVMTLLCLPYLYYN 82

Query: 261 VKLY 250
            +LY
Sbjct: 83  FQLY 86



 Score = 73.9 bits (180), Expect(2) = 5e-33
 Identities = 33/47 (70%), Positives = 42/47 (89%)
 Frame = -2

Query: 247 EQHHLIDVTEIFNLLNREKKRRLFKLAYLVILLFLSFFWMIWSVLED 107
           ++ HL+DVTEIFNLLN EKK+RLFKLAY+V+ LFL+ FWMI+S L+D
Sbjct: 88  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDD 134


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