BLASTX nr result

ID: Dioscorea21_contig00029447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029447
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]   117   1e-24
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   112   2e-23
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     112   4e-23
gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Ja...   111   5e-23
ref|NP_001052201.1| Os04g0191000 [Oryza sativa Japonica Group] g...   111   5e-23

>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
          Length = 1259

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/82 (67%), Positives = 65/82 (79%)
 Frame = +2

Query: 2   PSTFQALMNSVFKQVMRKFVLVFFDDILIYSSSWETHLNHLETVFTLLHQNHLFAKASKC 181
           PSTFQALMNSVF+  +RKFVLVFFDDIL+YSSSW+ HL H++T+F LL Q+ LF K  KC
Sbjct: 576 PSTFQALMNSVFRPFLRKFVLVFFDDILVYSSSWQEHLQHVKTIFKLLRQHQLFVKFKKC 635

Query: 182 EFGCDTVNYLGHRISSAGVAVD 247
           EFG   + YLGH IS+ GV VD
Sbjct: 636 EFGKHELEYLGHIISADGVKVD 657


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/82 (67%), Positives = 63/82 (76%)
 Frame = +2

Query: 2   PSTFQALMNSVFKQVMRKFVLVFFDDILIYSSSWETHLNHLETVFTLLHQNHLFAKASKC 181
           P+TFQALMN VFK  +RKFVLVFFDDIL+YS+S E H++HL  V  LL  NHLFA   KC
Sbjct: 753 PATFQALMNEVFKPYLRKFVLVFFDDILVYSTSLEQHMHHLNVVLGLLATNHLFANLKKC 812

Query: 182 EFGCDTVNYLGHRISSAGVAVD 247
           EFG + V YLGH ISS GVA+D
Sbjct: 813 EFGKEEVAYLGHIISSKGVAMD 834


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/82 (62%), Positives = 61/82 (74%)
 Frame = +2

Query: 2    PSTFQALMNSVFKQVMRKFVLVFFDDILIYSSSWETHLNHLETVFTLLHQNHLFAKASKC 181
            P TFQ LMN VF+ + RK+VLVFFDDIL+YS +WE HL HLE VF +L ++ LF K SKC
Sbjct: 816  PCTFQGLMNQVFRHIARKYVLVFFDDILVYSPTWEQHLQHLEEVFAVLRKHQLFLKPSKC 875

Query: 182  EFGCDTVNYLGHRISSAGVAVD 247
             FG   V YLGH IS+AGV+ D
Sbjct: 876  TFGATVVEYLGHFISAAGVSTD 897


>gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Japonica Group]
           gi|108706172|gb|ABF93967.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1461

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/82 (63%), Positives = 63/82 (76%)
 Frame = +2

Query: 2   PSTFQALMNSVFKQVMRKFVLVFFDDILIYSSSWETHLNHLETVFTLLHQNHLFAKASKC 181
           P+TFQALMN V +  +R+FVLVFFDDILIYS +W  HL HL  V T+L ++ LF K SKC
Sbjct: 647 PATFQALMNDVLRSFLRRFVLVFFDDILIYSDTWADHLRHLRAVLTVLREHKLFIKRSKC 706

Query: 182 EFGCDTVNYLGHRISSAGVAVD 247
            FG D+V YLGH IS+AGVA+D
Sbjct: 707 AFGVDSVAYLGHVISAAGVAMD 728


>ref|NP_001052201.1| Os04g0191000 [Oryza sativa Japonica Group]
           gi|38346036|emb|CAE01900.2| OSJNBa0059D20.8 [Oryza
           sativa Japonica Group] gi|113563772|dbj|BAF14115.1|
           Os04g0191000 [Oryza sativa Japonica Group]
          Length = 1463

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/82 (63%), Positives = 63/82 (76%)
 Frame = +2

Query: 2   PSTFQALMNSVFKQVMRKFVLVFFDDILIYSSSWETHLNHLETVFTLLHQNHLFAKASKC 181
           P+TFQALMN V +  +R+FVLVFFDDILIYS +W  HL HL TV ++L Q+ LF K SKC
Sbjct: 641 PATFQALMNDVLRPFLRRFVLVFFDDILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSKC 700

Query: 182 EFGCDTVNYLGHRISSAGVAVD 247
            FG  +V+YLGH IS AGVA+D
Sbjct: 701 TFGSPSVSYLGHVISEAGVAMD 722


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