BLASTX nr result
ID: Dioscorea21_contig00029435
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00029435 (289 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi... 132 2e-29 ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ... 132 3e-29 ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi... 128 4e-28 ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [S... 125 3e-27 gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays] 121 5e-26 >ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera] Length = 727 Score = 132 bits (333), Expect = 2e-29 Identities = 59/95 (62%), Positives = 81/95 (85%) Frame = +1 Query: 4 GKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAK 183 GK IH +I+E+ I +D HLQS+L+ MY++CGSMD+A LF+++ K+LVASTAMV GY+K Sbjct: 242 GKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSK 301 Query: 184 IGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288 +G+IE AR++F++M +KDLVCWSAMISGY+ESD P Sbjct: 302 LGQIENARSVFNQMVKKDLVCWSAMISGYAESDSP 336 Score = 57.0 bits (136), Expect = 2e-06 Identities = 24/78 (30%), Positives = 51/78 (65%) Frame = +1 Query: 7 KAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAKI 186 K IH ++ ++G + ++LI MY+ CGS++ AR++FD++P K++++ T M+ +A Sbjct: 375 KWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMH 434 Query: 187 GEIETARAIFDEMPEKDL 240 G+ +A F +M ++++ Sbjct: 435 GDAGSALRFFHQMEDENI 452 >ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 726 Score = 132 bits (332), Expect = 3e-29 Identities = 57/95 (60%), Positives = 81/95 (85%) Frame = +1 Query: 4 GKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAK 183 G+ IH ++ ++G A+D+HLQ++LINMY+NCG+MD+ARK++D + K L+ STAM+ GYAK Sbjct: 241 GRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAK 300 Query: 184 IGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288 +G ++ AR IFD+M E+DLVCWSAMISGY+ESD+P Sbjct: 301 LGMVKDARFIFDQMIERDLVCWSAMISGYAESDQP 335 >ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Glycine max] Length = 721 Score = 128 bits (322), Expect = 4e-28 Identities = 56/95 (58%), Positives = 79/95 (83%) Frame = +1 Query: 4 GKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAK 183 GKAIH +I ++G + +H+Q+SL+NMY+NCG+M +AR+++D++P K +V STAM+ GYAK Sbjct: 236 GKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAK 295 Query: 184 IGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288 +G ++ AR IFD M EKDLVCWSAMISGY+ES +P Sbjct: 296 LGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQP 330 Score = 56.6 bits (135), Expect = 2e-06 Identities = 24/78 (30%), Positives = 53/78 (67%) Frame = +1 Query: 7 KAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAKI 186 K IH+Y ++G + ++LI+MY+ CG++ AR++F+ +P K++++ ++M+ +A Sbjct: 369 KWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMH 428 Query: 187 GEIETARAIFDEMPEKDL 240 G+ ++A A+F M E+++ Sbjct: 429 GDADSAIALFHRMKEQNI 446 >ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor] gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor] Length = 572 Score = 125 bits (315), Expect = 3e-27 Identities = 59/96 (61%), Positives = 81/96 (84%) Frame = +1 Query: 1 SGKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYA 180 +GK+IHSY+L S I ++AHL S+LIN+Y++C SM++A KL++ +P KDLV+STAMVFGYA Sbjct: 189 TGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYA 248 Query: 181 KIGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288 + + E AR IFD MPEKD+V WSAMISGY++S++P Sbjct: 249 RNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQP 284 Score = 57.4 bits (137), Expect = 1e-06 Identities = 23/73 (31%), Positives = 51/73 (69%) Frame = +1 Query: 7 KAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAKI 186 K IH++I +G+ H+ ++LI+M++ CG +++A +F+E+P K+++ T+M+ +A Sbjct: 323 KWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMH 382 Query: 187 GEIETARAIFDEM 225 G+ ++A +F++M Sbjct: 383 GDGKSALCLFEQM 395 >gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays] Length = 655 Score = 121 bits (304), Expect = 5e-26 Identities = 56/95 (58%), Positives = 80/95 (84%) Frame = +1 Query: 4 GKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAK 183 GKAIHSY+L S + + AH+ S+LI++Y++C +M++A KL++E+P KDLV+STAMV GYA+ Sbjct: 270 GKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYAR 329 Query: 184 IGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288 ++E AR+IFD MPEKD+V WSAMISGY +S++P Sbjct: 330 NRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQP 364 Score = 58.5 bits (140), Expect = 5e-07 Identities = 23/76 (30%), Positives = 54/76 (71%) Frame = +1 Query: 7 KAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAKI 186 K IH++I SG+ H+ ++LI+M++ CG +++A +F+E+P+K+++ T+M+ +A Sbjct: 403 KWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMH 462 Query: 187 GEIETARAIFDEMPEK 234 G+ +++ +F++M ++ Sbjct: 463 GDGKSSLRLFEQMKDE 478