BLASTX nr result

ID: Dioscorea21_contig00029435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029435
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   132   3e-29
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [S...   125   3e-27
gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]        121   5e-26

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score =  132 bits (333), Expect = 2e-29
 Identities = 59/95 (62%), Positives = 81/95 (85%)
 Frame = +1

Query: 4   GKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAK 183
           GK IH +I+E+ I +D HLQS+L+ MY++CGSMD+A  LF+++  K+LVASTAMV GY+K
Sbjct: 242 GKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSK 301

Query: 184 IGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288
           +G+IE AR++F++M +KDLVCWSAMISGY+ESD P
Sbjct: 302 LGQIENARSVFNQMVKKDLVCWSAMISGYAESDSP 336



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/78 (30%), Positives = 51/78 (65%)
 Frame = +1

Query: 7   KAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAKI 186
           K IH ++ ++G      + ++LI MY+ CGS++ AR++FD++P K++++ T M+  +A  
Sbjct: 375 KWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMH 434

Query: 187 GEIETARAIFDEMPEKDL 240
           G+  +A   F +M ++++
Sbjct: 435 GDAGSALRFFHQMEDENI 452


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  132 bits (332), Expect = 3e-29
 Identities = 57/95 (60%), Positives = 81/95 (85%)
 Frame = +1

Query: 4   GKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAK 183
           G+ IH ++ ++G A+D+HLQ++LINMY+NCG+MD+ARK++D +  K L+ STAM+ GYAK
Sbjct: 241 GRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAK 300

Query: 184 IGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288
           +G ++ AR IFD+M E+DLVCWSAMISGY+ESD+P
Sbjct: 301 LGMVKDARFIFDQMIERDLVCWSAMISGYAESDQP 335


>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  128 bits (322), Expect = 4e-28
 Identities = 56/95 (58%), Positives = 79/95 (83%)
 Frame = +1

Query: 4   GKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAK 183
           GKAIH +I ++G  + +H+Q+SL+NMY+NCG+M +AR+++D++P K +V STAM+ GYAK
Sbjct: 236 GKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAK 295

Query: 184 IGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288
           +G ++ AR IFD M EKDLVCWSAMISGY+ES +P
Sbjct: 296 LGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQP 330



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/78 (30%), Positives = 53/78 (67%)
 Frame = +1

Query: 7   KAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAKI 186
           K IH+Y  ++G      + ++LI+MY+ CG++  AR++F+ +P K++++ ++M+  +A  
Sbjct: 369 KWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMH 428

Query: 187 GEIETARAIFDEMPEKDL 240
           G+ ++A A+F  M E+++
Sbjct: 429 GDADSAIALFHRMKEQNI 446


>ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
           gi|241934770|gb|EES07915.1| hypothetical protein
           SORBIDRAFT_05g001710 [Sorghum bicolor]
          Length = 572

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/96 (61%), Positives = 81/96 (84%)
 Frame = +1

Query: 1   SGKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYA 180
           +GK+IHSY+L S I ++AHL S+LIN+Y++C SM++A KL++ +P KDLV+STAMVFGYA
Sbjct: 189 TGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYA 248

Query: 181 KIGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288
           +  + E AR IFD MPEKD+V WSAMISGY++S++P
Sbjct: 249 RNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQP 284



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/73 (31%), Positives = 51/73 (69%)
 Frame = +1

Query: 7   KAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAKI 186
           K IH++I  +G+    H+ ++LI+M++ CG +++A  +F+E+P K+++  T+M+  +A  
Sbjct: 323 KWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMH 382

Query: 187 GEIETARAIFDEM 225
           G+ ++A  +F++M
Sbjct: 383 GDGKSALCLFEQM 395


>gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
          Length = 655

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/95 (58%), Positives = 80/95 (84%)
 Frame = +1

Query: 4   GKAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAK 183
           GKAIHSY+L S + + AH+ S+LI++Y++C +M++A KL++E+P KDLV+STAMV GYA+
Sbjct: 270 GKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYAR 329

Query: 184 IGEIETARAIFDEMPEKDLVCWSAMISGYSESDKP 288
             ++E AR+IFD MPEKD+V WSAMISGY +S++P
Sbjct: 330 NRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQP 364



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/76 (30%), Positives = 54/76 (71%)
 Frame = +1

Query: 7   KAIHSYILESGIAMDAHLQSSLINMYSNCGSMDIARKLFDEIPVKDLVASTAMVFGYAKI 186
           K IH++I  SG+    H+ ++LI+M++ CG +++A  +F+E+P+K+++  T+M+  +A  
Sbjct: 403 KWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMH 462

Query: 187 GEIETARAIFDEMPEK 234
           G+ +++  +F++M ++
Sbjct: 463 GDGKSSLRLFEQMKDE 478