BLASTX nr result

ID: Dioscorea21_contig00029419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029419
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269563.2| PREDICTED: F-box protein At4g35930, partial ...   106   2e-21
emb|CBI29597.3| unnamed protein product [Vitis vinifera]              106   2e-21
emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]   106   2e-21
ref|XP_002467186.1| hypothetical protein SORBIDRAFT_01g021140 [S...   102   3e-20
ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>ref|XP_002269563.2| PREDICTED: F-box protein At4g35930, partial [Vitis vinifera]
          Length = 189

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/105 (53%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = -3

Query: 441 SRQEMLLTKTPLPNEHWPFLSKDGGGNEAMKIIPQTPKAPKPAPRN-HKSNTMETKQVAA 265
           SRQEML T TPLP EHWPF+SK G G       P TPKAP+  PR   +    E +Q+AA
Sbjct: 83  SRQEMLRTMTPLPTEHWPFVSK-GDGKGVFLASPHTPKAPRHGPRPPSRLKVTEMRQIAA 141

Query: 264 ILFQEPSNPPNNAPQKKVPRLVCKPINSSRVLLYEDELCQAVAQN 130
           +LFQE + P        +P+ +CK + S+RVL YEDELCQAVAQN
Sbjct: 142 VLFQESALPSRCMVPSILPKPLCKSLASNRVLFYEDELCQAVAQN 186


>emb|CBI29597.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/105 (53%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = -3

Query: 441 SRQEMLLTKTPLPNEHWPFLSKDGGGNEAMKIIPQTPKAPKPAPRN-HKSNTMETKQVAA 265
           SRQEML T TPLP EHWPF+SK G G       P TPKAP+  PR   +    E +Q+AA
Sbjct: 68  SRQEMLRTMTPLPTEHWPFVSK-GDGKGVFLASPHTPKAPRHGPRPPSRLKVTEMRQIAA 126

Query: 264 ILFQEPSNPPNNAPQKKVPRLVCKPINSSRVLLYEDELCQAVAQN 130
           +LFQE + P        +P+ +CK + S+RVL YEDELCQAVAQN
Sbjct: 127 VLFQESALPSRCMVPSILPKPLCKSLASNRVLFYEDELCQAVAQN 171


>emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]
          Length = 463

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/105 (53%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = -3

Query: 441 SRQEMLLTKTPLPNEHWPFLSKDGGGNEAMKIIPQTPKAPKPAPRN-HKSNTMETKQVAA 265
           SRQEML T TPLP EHWPF+SK G G       P TPKAP+  PR   +    E +Q+AA
Sbjct: 357 SRQEMLRTMTPLPTEHWPFVSK-GDGKGVFLASPHTPKAPRHGPRPPSRLKVTEMRQIAA 415

Query: 264 ILFQEPSNPPNNAPQKKVPRLVCKPINSSRVLLYEDELCQAVAQN 130
           +LFQE + P        +P+ +CK + S+RVL YEDELCQAVAQN
Sbjct: 416 VLFQESALPSRCMVPSILPKPLCKSLASNRVLFYEDELCQAVAQN 460


>ref|XP_002467186.1| hypothetical protein SORBIDRAFT_01g021140 [Sorghum bicolor]
           gi|241921040|gb|EER94184.1| hypothetical protein
           SORBIDRAFT_01g021140 [Sorghum bicolor]
          Length = 265

 Score =  102 bits (254), Expect = 3e-20
 Identities = 56/109 (51%), Positives = 70/109 (64%), Gaps = 5/109 (4%)
 Frame = -3

Query: 441 SRQEMLLTKTPLPNEHWPFLSKDGGGNEAMKIIPQTPKAPKPAPRNHKSNTMETKQVAAI 262
           SRQE+LL KTPLP EHWPFL  D  G +     P+TP+APK A R  +   ++ K + A+
Sbjct: 156 SRQELLLNKTPLPTEHWPFLRID--GKDVRVSTPRTPRAPKHAARLSRLKLVDVKPITAV 213

Query: 261 LFQEPSNP-PNNAPQKKV----PRLVCKPINSSRVLLYEDELCQAVAQN 130
           LFQE   P P+   ++ V    PR VCK   S RVLLYE+ELC+AVAQN
Sbjct: 214 LFQESPTPFPSKRLRRSVPPGLPRPVCKAAPSPRVLLYEEELCEAVAQN 262


>ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|222836730|gb|EEE75123.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/105 (50%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
 Frame = -3

Query: 441 SRQEMLLTKTPLPNEHWPFLSKDGGGNEAMKIIPQTPKAPKPAPRN-HKSNTMETKQVAA 265
           SRQEMLLT TP P EHWPF+SK G G       P TPKAP+  PR   +    E K +AA
Sbjct: 182 SRQEMLLTMTPRPTEHWPFMSK-GSGKGIFMSTPHTPKAPRHGPRPPSRIKITEMKSIAA 240

Query: 264 ILFQEPSNPPNNAPQKKVPRLVCKPINSSRVLLYEDELCQAVAQN 130
           +LFQ+ +          +P+ +CK + S+RVL YE+ELCQAVAQN
Sbjct: 241 VLFQDSTLSSRCMVPSTLPKPLCKSVASNRVLFYEEELCQAVAQN 285


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