BLASTX nr result

ID: Dioscorea21_contig00029405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029405
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   205   4e-51
emb|CBI15349.3| unnamed protein product [Vitis vinifera]              205   4e-51
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...   201   4e-50
ref|XP_004155039.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   194   8e-48
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   194   8e-48

>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  205 bits (521), Expect = 4e-51
 Identities = 94/118 (79%), Positives = 106/118 (89%)
 Frame = +1

Query: 4   MTRSSSVSFNIGIYDGDTSQEHRIWIRDNARLLITNPDMLHMSILPYHRQFQRILINLRF 183
           MT+ S VS  +G+YDGDTS+E R+W+RDNARLLITNPDMLHMSILP+H QF+RIL NLRF
Sbjct: 553 MTKGSDVSLKMGVYDGDTSEEDRMWLRDNARLLITNPDMLHMSILPFHGQFRRILSNLRF 612

Query: 184 VVIDETHMYKGAFGCHTALILRRLRRICSHVHGSDPSFIFCTATSANPREHAMGLANL 357
           V+IDE H YKGAFGCHTA ILRRLRR+C HV+GSDPSFIFCTATSANPR+HAM LANL
Sbjct: 613 VIIDEAHAYKGAFGCHTAFILRRLRRLCHHVYGSDPSFIFCTATSANPRDHAMELANL 670


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  205 bits (521), Expect = 4e-51
 Identities = 94/118 (79%), Positives = 106/118 (89%)
 Frame = +1

Query: 4   MTRSSSVSFNIGIYDGDTSQEHRIWIRDNARLLITNPDMLHMSILPYHRQFQRILINLRF 183
           MT+ S VS  +G+YDGDTS+E R+W+RDNARLLITNPDMLHMSILP+H QF+RIL NLRF
Sbjct: 493 MTKGSDVSLKMGVYDGDTSEEDRMWLRDNARLLITNPDMLHMSILPFHGQFRRILSNLRF 552

Query: 184 VVIDETHMYKGAFGCHTALILRRLRRICSHVHGSDPSFIFCTATSANPREHAMGLANL 357
           V+IDE H YKGAFGCHTA ILRRLRR+C HV+GSDPSFIFCTATSANPR+HAM LANL
Sbjct: 553 VIIDEAHAYKGAFGCHTAFILRRLRRLCHHVYGSDPSFIFCTATSANPRDHAMELANL 610


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 1189

 Score =  201 bits (512), Expect = 4e-50
 Identities = 97/118 (82%), Positives = 101/118 (85%)
 Frame = +1

Query: 4   MTRSSSVSFNIGIYDGDTSQEHRIWIRDNARLLITNPDMLHMSILPYHRQFQRILINLRF 183
           M +    S NIGIYDGDTSQ  R W+RDNARLLITNPDMLHMSILP+HRQF RIL NLRF
Sbjct: 514 MAKEFDTSINIGIYDGDTSQTERPWLRDNARLLITNPDMLHMSILPFHRQFSRILSNLRF 573

Query: 184 VVIDETHMYKGAFGCHTALILRRLRRICSHVHGSDPSFIFCTATSANPREHAMGLANL 357
           VVIDE H YKGAFGCHTALILRRLRRICSHV+GSDPSFIF TATSANP EH M LANL
Sbjct: 574 VVIDEAHYYKGAFGCHTALILRRLRRICSHVYGSDPSFIFSTATSANPHEHCMELANL 631


>ref|XP_004155039.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 663

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/118 (77%), Positives = 102/118 (86%)
 Frame = +1

Query: 4   MTRSSSVSFNIGIYDGDTSQEHRIWIRDNARLLITNPDMLHMSILPYHRQFQRILINLRF 183
           M +  + + NIG+YDGDTS   RI +RDNARLLITNPDMLH+SILP+HRQF RIL NLRF
Sbjct: 132 MMKGFNHNLNIGVYDGDTSLADRILLRDNARLLITNPDMLHVSILPHHRQFGRILSNLRF 191

Query: 184 VVIDETHMYKGAFGCHTALILRRLRRICSHVHGSDPSFIFCTATSANPREHAMGLANL 357
           +VIDE H YKGAFGCHTALILRRLRR+CSHV+GSDPSFIFCTATSANPREH M L NL
Sbjct: 192 IVIDEAHTYKGAFGCHTALILRRLRRLCSHVYGSDPSFIFCTATSANPREHCMELGNL 249


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/118 (77%), Positives = 102/118 (86%)
 Frame = +1

Query: 4   MTRSSSVSFNIGIYDGDTSQEHRIWIRDNARLLITNPDMLHMSILPYHRQFQRILINLRF 183
           M +  + + NIG+YDGDTS   RI +RDNARLLITNPDMLH+SILP+HRQF RIL NLRF
Sbjct: 552 MMKGFNHNLNIGVYDGDTSLADRILLRDNARLLITNPDMLHVSILPHHRQFGRILSNLRF 611

Query: 184 VVIDETHMYKGAFGCHTALILRRLRRICSHVHGSDPSFIFCTATSANPREHAMGLANL 357
           +VIDE H YKGAFGCHTALILRRLRR+CSHV+GSDPSFIFCTATSANPREH M L NL
Sbjct: 612 IVIDEAHTYKGAFGCHTALILRRLRRLCSHVYGSDPSFIFCTATSANPREHCMELGNL 669


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