BLASTX nr result

ID: Dioscorea21_contig00029325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029325
         (1526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550541.1| PREDICTED: RING-H2 finger protein ATL2-like ...    86   3e-14
ref|XP_003528631.1| PREDICTED: RING-H2 finger protein ATL2-like ...    85   6e-14
ref|XP_002883022.1| hypothetical protein ARALYDRAFT_479140 [Arab...    84   1e-13
ref|XP_004134225.1| PREDICTED: RING-H2 finger protein ATL2-like ...    83   2e-13
gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana]     83   2e-13

>ref|XP_003550541.1| PREDICTED: RING-H2 finger protein ATL2-like [Glycine max]
          Length = 245

 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 34/60 (56%), Positives = 44/60 (73%)
 Frame = -1

Query: 182 RGIDPDLLQSLPITVRSASNTPIDCSVCLSKIEEGEKMRILPKCRHEFHVECIDMWFSSH 3
           RG+ P ++ +LP+   SA+N P +C+VCLS+ E GE  R+LPKC H FH ECIDMWF SH
Sbjct: 72  RGLHPSVISTLPMFTFSATNNPTECAVCLSEFENGETGRVLPKCNHSFHTECIDMWFQSH 131


>ref|XP_003528631.1| PREDICTED: RING-H2 finger protein ATL2-like [Glycine max]
          Length = 245

 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = -1

Query: 182 RGIDPDLLQSLPITVRSASNTPIDCSVCLSKIEEGEKMRILPKCRHEFHVECIDMWFSSH 3
           RG+ P ++ +LP+   SA+N P +C+VCLS+ E GE  R+LPKC H FH ECID+WF SH
Sbjct: 72  RGLHPSVISTLPVFTFSAANNPTECAVCLSEFENGETGRVLPKCNHSFHTECIDVWFQSH 131


>ref|XP_002883022.1| hypothetical protein ARALYDRAFT_479140 [Arabidopsis lyrata subsp.
           lyrata] gi|297328862|gb|EFH59281.1| hypothetical protein
           ARALYDRAFT_479140 [Arabidopsis lyrata subsp. lyrata]
          Length = 304

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
 Frame = -1

Query: 197 NLYANRGIDPDLLQSLPITVRS--ASNTPIDCSVCLSKIEEGEKMRILPKCRHEFHVECI 24
           ++ A+RG+DP++++SLP+   S      PI+C+VCLS+ EE E  R+LP C+H FHV+CI
Sbjct: 88  SVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESESGRVLPNCKHTFHVDCI 147

Query: 23  DMWFSSH 3
           DMWF SH
Sbjct: 148 DMWFHSH 154


>ref|XP_004134225.1| PREDICTED: RING-H2 finger protein ATL2-like [Cucumis sativus]
           gi|449503830|ref|XP_004162198.1| PREDICTED: RING-H2
           finger protein ATL2-like [Cucumis sativus]
          Length = 293

 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
 Frame = -1

Query: 194 LYANRGIDPDLLQSLPI-TVRSASNT-PIDCSVCLSKIEEGEKMRILPKCRHEFHVECID 21
           L  +RG+D  +L SLP+ T  S S++ PIDC+VCLS+ EE EK R LPKC H FH++CID
Sbjct: 83  LSQHRGLDSSVLNSLPVFTFSSKSHSDPIDCAVCLSEFEENEKGRTLPKCSHSFHIDCID 142

Query: 20  MWFSSH 3
           MWF SH
Sbjct: 143 MWFHSH 148


>gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana]
          Length = 304

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
 Frame = -1

Query: 197 NLYANRGIDPDLLQSLPITVRS--ASNTPIDCSVCLSKIEEGEKMRILPKCRHEFHVECI 24
           ++ A+RG+DP++++SLP+   S      PI+C+VCLS+ EE E  R+LP C+H FHV+CI
Sbjct: 88  SVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCI 147

Query: 23  DMWFSSH 3
           DMWF SH
Sbjct: 148 DMWFHSH 154


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