BLASTX nr result

ID: Dioscorea21_contig00029323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029323
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW66575.1| hypothetical protein ZEAMMB73_667331 [Zea mays]         57   2e-06
gb|AFW66572.1| receptor expression-enhancing protein 3 [Zea mays]      57   2e-06
ref|NP_001141149.1| uncharacterized LOC100273235 [Zea mays] gi|1...    57   2e-06
ref|XP_002451413.1| hypothetical protein SORBIDRAFT_04g001756 [S...    55   7e-06

>gb|AFW66575.1| hypothetical protein ZEAMMB73_667331 [Zea mays]
          Length = 211

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/141 (33%), Positives = 58/141 (41%)
 Frame = +3

Query: 183 TIQQRQQSTQTPATTVTADAQPAPSSQQLTRIPASSAKVQLQPQAPVKPGASSAAAPPTV 362
           T +Q  Q  Q P    T    PAP       IPA SA        P+ P  + A  PPT 
Sbjct: 83  TQRQAHQQQQRPPPPRTRQVNPAPPP-----IPAPSAP-------PMPPQPAQAQVPPTP 130

Query: 363 LQPLKTGXXXXXXXXXXXXNLSAGTPHSTSENVADSAPGEAEVMQIVEIDEVESANATPP 542
            +PL                +    P +  E  A +   + E MQ+       S    PP
Sbjct: 131 PRPL--------VPVVPPGAVPPAPPPTAPEATATNGLQDTETMQVDPPRASLSGPPLPP 182

Query: 543 QEAAIEEAIRLTRGRLRKRAA 605
           +E  IEEAIRLTRGRLR+R A
Sbjct: 183 EETLIEEAIRLTRGRLRRRLA 203


>gb|AFW66572.1| receptor expression-enhancing protein 3 [Zea mays]
          Length = 352

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/141 (33%), Positives = 58/141 (41%)
 Frame = +3

Query: 183 TIQQRQQSTQTPATTVTADAQPAPSSQQLTRIPASSAKVQLQPQAPVKPGASSAAAPPTV 362
           T +Q  Q  Q P    T    PAP       IPA SA        P+ P  + A  PPT 
Sbjct: 224 TQRQAHQQQQRPPPPRTRQVNPAPPP-----IPAPSAP-------PMPPQPAQAQVPPTP 271

Query: 363 LQPLKTGXXXXXXXXXXXXNLSAGTPHSTSENVADSAPGEAEVMQIVEIDEVESANATPP 542
            +PL                +    P +  E  A +   + E MQ+       S    PP
Sbjct: 272 PRPL--------VPVVPPGAVPPAPPPTAPEATATNGLQDTETMQVDPPRASLSGPPLPP 323

Query: 543 QEAAIEEAIRLTRGRLRKRAA 605
           +E  IEEAIRLTRGRLR+R A
Sbjct: 324 EETLIEEAIRLTRGRLRRRLA 344


>ref|NP_001141149.1| uncharacterized LOC100273235 [Zea mays] gi|194702898|gb|ACF85533.1|
           unknown [Zea mays] gi|224030735|gb|ACN34443.1| unknown
           [Zea mays] gi|413926642|gb|AFW66574.1| receptor
           expression-enhancing protein 3 [Zea mays]
          Length = 276

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/141 (33%), Positives = 58/141 (41%)
 Frame = +3

Query: 183 TIQQRQQSTQTPATTVTADAQPAPSSQQLTRIPASSAKVQLQPQAPVKPGASSAAAPPTV 362
           T +Q  Q  Q P    T    PAP       IPA SA        P+ P  + A  PPT 
Sbjct: 148 TQRQAHQQQQRPPPPRTRQVNPAPPP-----IPAPSAP-------PMPPQPAQAQVPPTP 195

Query: 363 LQPLKTGXXXXXXXXXXXXNLSAGTPHSTSENVADSAPGEAEVMQIVEIDEVESANATPP 542
            +PL                +    P +  E  A +   + E MQ+       S    PP
Sbjct: 196 PRPL--------VPVVPPGAVPPAPPPTAPEATATNGLQDTETMQVDPPRASLSGPPLPP 247

Query: 543 QEAAIEEAIRLTRGRLRKRAA 605
           +E  IEEAIRLTRGRLR+R A
Sbjct: 248 EETLIEEAIRLTRGRLRRRLA 268


>ref|XP_002451413.1| hypothetical protein SORBIDRAFT_04g001756 [Sorghum bicolor]
           gi|241931244|gb|EES04389.1| hypothetical protein
           SORBIDRAFT_04g001756 [Sorghum bicolor]
          Length = 284

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 50/143 (34%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
 Frame = +3

Query: 189 QQRQQSTQTPATTVTADAQP---APSSQQLTRIPASSAKVQLQPQAPVKPGASSAAAPPT 359
           QQ+QQ    P T     A P   APS+  +   PA  A+V   P  P  P A   A PP 
Sbjct: 156 QQQQQRPPPPRTRQVNPAPPPVPAPSAPPMPPQPAQ-AQVPPTPMPPPIPVAPPGAVPPA 214

Query: 360 VLQPLKTGXXXXXXXXXXXXNLSAGTPHSTSENVADSAPGEAEVMQIVEIDEVESANATP 539
              P                      P    E  A + P + E MQ V+   V  + A P
Sbjct: 215 QPPP----------------------PPLAPEAAATNGPQDTEAMQ-VDPPRVSLSGAPP 251

Query: 540 P---QEAAIEEAIRLTRGRLRKR 599
           P   +E  IEEAIRLTRGRLR+R
Sbjct: 252 PLPPEETLIEEAIRLTRGRLRRR 274


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