BLASTX nr result

ID: Dioscorea21_contig00029316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029316
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   244   6e-63
ref|XP_003576863.1| PREDICTED: pentatricopeptide repeat-containi...   239   3e-61
gb|AFW59818.1| hypothetical protein ZEAMMB73_731783 [Zea mays]        236   3e-60
ref|NP_001147836.1| vegetative storage protein [Zea mays] gi|195...   236   3e-60
tpg|DAA43298.1| TPA: vegetative storage protein [Zea mays]            234   1e-59

>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  244 bits (624), Expect = 6e-63
 Identities = 122/201 (60%), Positives = 162/201 (80%), Gaps = 2/201 (0%)
 Frame = -3

Query: 597 DEFTFLAILSSLSNAGMVREAEEWIDRMEKCYSVKPGLEHYTCLIGAMVRIARLDSAEKL 418
           DE++FLAIL+SL NAG+V EAE W+ RM+  Y ++PGLEHYTCL+G M R  +L+ AE++
Sbjct: 313 DEYSFLAILTSLYNAGLVGEAEGWLTRMKVDYGLEPGLEHYTCLVGTMGRAGQLEDAERI 372

Query: 417 ALTMPFEPDAAVWRTLLSGSMVYNVAADIGFAAGRRLLELDPRDDSAYVILSNMYLLAGK 238
           A+TMPFEPDAAVWR LLS   ++  AAD+ +A GRRL+ELDP+DDSAYVI++N+    G+
Sbjct: 373 AMTMPFEPDAAVWRALLSSCAMHG-AADMAWAMGRRLMELDPQDDSAYVIVANVLATNGR 431

Query: 237 KDEVAGLWTEMRNKGVKKEGGKSWIEVRGEVHVFVAGDRKHERIREIYAKLEELMEDVKE 58
            DEVA +   M+++ VKKEGG+SWIEVRG+VHVF+AGDR+HER  EIYAKL ELME ++E
Sbjct: 432 WDEVAEVRKMMKDRMVKKEGGRSWIEVRGKVHVFLAGDRRHERSHEIYAKLVELMEKIEE 491

Query: 57  IG--DCLKDDESVWYHSERLA 1
           +G  + +K  E++WYHSE+LA
Sbjct: 492 LGYKEGVK-KETLWYHSEKLA 511


>ref|XP_003576863.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 574

 Score =  239 bits (610), Expect = 3e-61
 Identities = 111/199 (55%), Positives = 158/199 (79%)
 Frame = -3

Query: 597 DEFTFLAILSSLSNAGMVREAEEWIDRMEKCYSVKPGLEHYTCLIGAMVRIARLDSAEKL 418
           D  TFLA+L++ SNAG   +AE W++ M+  Y+VKP L HYTC++GAM R+ RL+ A+ +
Sbjct: 312 DRLTFLALLTACSNAGAAADAEFWLEAMQLKYNVKPDLAHYTCVVGAMARVGRLEDADSI 371

Query: 417 ALTMPFEPDAAVWRTLLSGSMVYNVAADIGFAAGRRLLELDPRDDSAYVILSNMYLLAGK 238
             TMP +PDAAVWRTLL+G +V++  AD+    G+RLLE+DP+DDSAYV+L+N+Y  AG+
Sbjct: 372 VCTMPCKPDAAVWRTLLAGCVVHH-KADMAGVMGQRLLEIDPKDDSAYVMLANVYSAAGR 430

Query: 237 KDEVAGLWTEMRNKGVKKEGGKSWIEVRGEVHVFVAGDRKHERIREIYAKLEELMEDVKE 58
            D+VA  WT MR+ GV+KEGG+SWIEVRG+VHVFVA D++HE++ +IY KL+EL+++V++
Sbjct: 431 SDDVAEAWTAMRDHGVRKEGGRSWIEVRGQVHVFVANDKRHEQLLDIYEKLDELIKEVEK 490

Query: 57  IGDCLKDDESVWYHSERLA 1
           +G   + DE +W+HSERLA
Sbjct: 491 LG-YKEVDEGLWHHSERLA 508


>gb|AFW59818.1| hypothetical protein ZEAMMB73_731783 [Zea mays]
          Length = 572

 Score =  236 bits (601), Expect = 3e-60
 Identities = 116/199 (58%), Positives = 154/199 (77%)
 Frame = -3

Query: 597 DEFTFLAILSSLSNAGMVREAEEWIDRMEKCYSVKPGLEHYTCLIGAMVRIARLDSAEKL 418
           D  TFLA+L++ SNAG   EAE W++ M+  YSVKPGLEHYTC++GAM R+ RL+ AE +
Sbjct: 311 DGLTFLAVLTACSNAGAATEAEFWLETMQSKYSVKPGLEHYTCVVGAMARMGRLEDAESV 370

Query: 417 ALTMPFEPDAAVWRTLLSGSMVYNVAADIGFAAGRRLLELDPRDDSAYVILSNMYLLAGK 238
           A TMP +PDAAVWRTLL G +V+    D+  + G+RLLE++P+DDSAYV+L+N+Y  AGK
Sbjct: 371 ACTMPCKPDAAVWRTLLMGCVVHR-KVDLAESMGQRLLEINPKDDSAYVLLANVYSAAGK 429

Query: 237 KDEVAGLWTEMRNKGVKKEGGKSWIEVRGEVHVFVAGDRKHERIREIYAKLEELMEDVKE 58
           K+E A  WT MR+ GV+KEGG+SWIEVRG VHVFVA +R+HE++ EIY KL EL+ +V++
Sbjct: 430 KNEEAEAWTAMRDHGVRKEGGRSWIEVRGLVHVFVANERRHEQLLEIYDKLTELILEVEK 489

Query: 57  IGDCLKDDESVWYHSERLA 1
           +G   + DE   +HSERLA
Sbjct: 490 LG-YKETDEGFGHHSERLA 507


>ref|NP_001147836.1| vegetative storage protein [Zea mays] gi|195614038|gb|ACG28849.1|
           vegetative storage protein [Zea mays]
          Length = 563

 Score =  236 bits (601), Expect = 3e-60
 Identities = 114/199 (57%), Positives = 152/199 (76%)
 Frame = -3

Query: 597 DEFTFLAILSSLSNAGMVREAEEWIDRMEKCYSVKPGLEHYTCLIGAMVRIARLDSAEKL 418
           D  TFLA+L+S SNAG   EA+ W++ M+  Y VKP LEHYTC++GAM R+  L+ AE  
Sbjct: 302 DGLTFLAVLTSCSNAGAATEAKFWLEAMQSKYGVKPDLEHYTCVVGAMARVGHLEDAESF 361

Query: 417 ALTMPFEPDAAVWRTLLSGSMVYNVAADIGFAAGRRLLELDPRDDSAYVILSNMYLLAGK 238
           A TMP +PDAAVWRTLL G +V+    D+  + G+RLLE++P+DDSAYV+L+N+Y  AGK
Sbjct: 362 ACTMPCKPDAAVWRTLLMGCVVHR-RVDMAESMGQRLLEINPKDDSAYVMLANVYSTAGK 420

Query: 237 KDEVAGLWTEMRNKGVKKEGGKSWIEVRGEVHVFVAGDRKHERIREIYAKLEELMEDVKE 58
            DE A  WT MR+ GV+KEGG+SWIEVRG VHVFVA +R+HE++ EIY KL EL+++V++
Sbjct: 421 TDEEAEAWTAMRDHGVRKEGGRSWIEVRGLVHVFVANERRHEQLLEIYDKLHELIQEVEK 480

Query: 57  IGDCLKDDESVWYHSERLA 1
           +G   + DE +W+HSERLA
Sbjct: 481 LG-YKEADERLWHHSERLA 498


>tpg|DAA43298.1| TPA: vegetative storage protein [Zea mays]
          Length = 563

 Score =  234 bits (596), Expect = 1e-59
 Identities = 113/199 (56%), Positives = 152/199 (76%)
 Frame = -3

Query: 597 DEFTFLAILSSLSNAGMVREAEEWIDRMEKCYSVKPGLEHYTCLIGAMVRIARLDSAEKL 418
           D  TFLA+L+S SNAG   EA+ W++ M+  Y VKP LEHYTC++GAM R+  L+ AE  
Sbjct: 302 DGLTFLAVLTSCSNAGAATEAKFWLEAMQSKYGVKPDLEHYTCVVGAMARVGHLEDAESF 361

Query: 417 ALTMPFEPDAAVWRTLLSGSMVYNVAADIGFAAGRRLLELDPRDDSAYVILSNMYLLAGK 238
           A TMP +PDAAVWRTLL G +V+    D+  + G+RLLE++P+DDSAYV+L+N+Y  AGK
Sbjct: 362 ACTMPCKPDAAVWRTLLMGCVVHR-RVDMAESMGQRLLEINPKDDSAYVMLANVYSTAGK 420

Query: 237 KDEVAGLWTEMRNKGVKKEGGKSWIEVRGEVHVFVAGDRKHERIREIYAKLEELMEDVKE 58
            +E A  WT MR+ GV+KEGG+SWIEVRG VHVFVA +R+HE++ EIY KL EL+++V++
Sbjct: 421 TNEEAEAWTAMRDHGVRKEGGRSWIEVRGLVHVFVANERRHEQLLEIYDKLHELIQEVEK 480

Query: 57  IGDCLKDDESVWYHSERLA 1
           +G   + DE +W+HSERLA
Sbjct: 481 LG-YKEADERLWHHSERLA 498


Top