BLASTX nr result

ID: Dioscorea21_contig00029294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029294
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ96216.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   3e-09
dbj|BAJ85798.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   3e-09
ref|XP_002283809.1| PREDICTED: argininosuccinate lyase [Vitis vi...    63   3e-08
ref|XP_004136255.1| PREDICTED: argininosuccinate lyase-like [Cuc...    61   8e-08
gb|ABK25117.1| unknown [Picea sitchensis]                              61   1e-07

>dbj|BAJ96216.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 545

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
 Frame = +2

Query: 29  AHPHTQLLP---SLPRRRLNIDAGAGKRRCWTPSAEAMAAELKMEHEKKGE--KENKLWG 193
           A  H+ L P   SLPR R+             PS  A+AA +       GE  KE KLWG
Sbjct: 32  ATSHSLLSPAPTSLPRARITFPVARAVALRRRPSFPAVAAAVSSMASSDGEEKKETKLWG 91

Query: 194 GRFQESVTDAVERFSESVSFDKQL 265
           GRF+E VTDAVERF+ES+S+D QL
Sbjct: 92  GRFEEGVTDAVERFTESISYDWQL 115


>dbj|BAJ85798.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 542

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
 Frame = +2

Query: 29  AHPHTQLLP---SLPRRRLNIDAGAGKRRCWTPSAEAMAAELKMEHEKKGE--KENKLWG 193
           A  H+ L P   SLPR R+             PS  A+AA +       GE  KE KLWG
Sbjct: 29  ATSHSLLSPAPTSLPRARITFPVARAVALRRRPSFPAVAAAVSSMASSDGEEKKETKLWG 88

Query: 194 GRFQESVTDAVERFSESVSFDKQL 265
           GRF+E VTDAVERF+ES+S+D QL
Sbjct: 89  GRFEEGVTDAVERFTESISYDWQL 112


>ref|XP_002283809.1| PREDICTED: argininosuccinate lyase [Vitis vinifera]
          Length = 525

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/87 (40%), Positives = 49/87 (56%)
 Frame = +2

Query: 5   SSVEMKTLAHPHTQLLPSLPRRRLNIDAGAGKRRCWTPSAEAMAAELKMEHEKKGEKENK 184
           SS  ++  + P    + + P+ R ++      ++ W  S+  M         KK  KE K
Sbjct: 6   SSSTVQLQSPPSGLSINTTPKPRNSVTFKHRSKQVWCTSSSTMKTSATDPSTKKA-KEAK 64

Query: 185 LWGGRFQESVTDAVERFSESVSFDKQL 265
           LWGGRF+E VTDAVERF+ES+SFDK L
Sbjct: 65  LWGGRFEEGVTDAVERFTESISFDKAL 91


>ref|XP_004136255.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus]
           gi|449526427|ref|XP_004170215.1| PREDICTED:
           argininosuccinate lyase-like [Cucumis sativus]
          Length = 523

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/36 (75%), Positives = 33/36 (91%)
 Frame = +2

Query: 158 EKKGEKENKLWGGRFQESVTDAVERFSESVSFDKQL 265
           E + +KE KLWGGRF+ESVTDAVERF+ES+S+DKQL
Sbjct: 58  ENRTDKEVKLWGGRFEESVTDAVERFTESISYDKQL 93


>gb|ABK25117.1| unknown [Picea sitchensis]
          Length = 530

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/49 (65%), Positives = 39/49 (79%)
 Frame = +2

Query: 119 SAEAMAAELKMEHEKKGEKENKLWGGRFQESVTDAVERFSESVSFDKQL 265
           S +AMA E     E+K +KE KLWG RFQ+SVTDAVE+FSESVS+DK+L
Sbjct: 53  SVDAMAKE-----EEKQKKEVKLWGERFQDSVTDAVEKFSESVSYDKRL 96


Top