BLASTX nr result

ID: Dioscorea21_contig00029274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029274
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315245.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_004169488.1| PREDICTED: psbP-like protein 2, chloroplasti...    72   6e-11
ref|XP_004149826.1| PREDICTED: psbP-like protein 2, chloroplasti...    72   6e-11
ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplasti...    72   6e-11
ref|XP_003558210.1| PREDICTED: psbP-like protein 2, chloroplasti...    67   2e-09

>ref|XP_002315245.1| predicted protein [Populus trichocarpa] gi|222864285|gb|EEF01416.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = -3

Query: 209 CSKEVPLNDNYEILSSVCYKRRALLVGASVLTSSMFNSNFAFAEEVPEKYRAFVDFVDGY 30
           C+ E   N+      S C KRR LL+G   LT+S+  +NF FAEE+P+ Y +FVDF DGY
Sbjct: 42  CTAEATFNEE-----SNC-KRRLLLLGVGALTTSLVPANFLFAEEIPKNYTSFVDFEDGY 95

Query: 29  SYYYPADW 6
           SYYYP+DW
Sbjct: 96  SYYYPSDW 103


>ref|XP_004169488.1| PREDICTED: psbP-like protein 2, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 202

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/51 (58%), Positives = 38/51 (74%)
 Frame = -3

Query: 155 YKRRALLVGASVLTSSMFNSNFAFAEEVPEKYRAFVDFVDGYSYYYPADWR 3
           Y RR LL+G   L +S+  ++  FAEE+P+ YRAFVD  DGYSYYYP+DWR
Sbjct: 55  YNRRPLLLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWR 105


>ref|XP_004149826.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 236

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/51 (58%), Positives = 38/51 (74%)
 Frame = -3

Query: 155 YKRRALLVGASVLTSSMFNSNFAFAEEVPEKYRAFVDFVDGYSYYYPADWR 3
           Y RR LL+G   L +S+  ++  FAEE+P+ YRAFVD  DGYSYYYP+DWR
Sbjct: 55  YNRRPLLLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWR 105


>ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplastic [Vitis vinifera]
           gi|296086288|emb|CBI31729.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/73 (43%), Positives = 48/73 (65%)
 Frame = -3

Query: 221 TIKACSKEVPLNDNYEILSSVCYKRRALLVGASVLTSSMFNSNFAFAEEVPEKYRAFVDF 42
           +I ACS+E   ++   +      +RR+LL+G  +L +++F ++   AEE+P  Y+AFVD 
Sbjct: 38  SISACSRETAFDEESHL------ERRSLLLGVGLLAANLFPASSLHAEEIPANYKAFVDL 91

Query: 41  VDGYSYYYPADWR 3
            DGYSYYYP DWR
Sbjct: 92  SDGYSYYYPLDWR 104


>ref|XP_003558210.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Brachypodium
           distachyon]
          Length = 226

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = -3

Query: 152 KRRALLVGASVLTSSMFNSNFAFAEEVPEKYRAFVDFVDGYSYYYPADWR 3
           KRR  L+GA  L++ + N + A+AEEVP+ YR++VD  DGYSY YPADWR
Sbjct: 44  KRRLALLGAGALSTVLLNRSSAYAEEVPKNYRSYVDANDGYSYLYPADWR 93