BLASTX nr result

ID: Dioscorea21_contig00029250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029250
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332375.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...    80   2e-13
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...    80   2e-13
emb|CAN61575.1| hypothetical protein VITISV_014037 [Vitis vinifera]    74   9e-12
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]     74   2e-11

>ref|XP_002332375.1| predicted protein [Populus trichocarpa] gi|222832179|gb|EEE70656.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   AMVAKEWLKRVLATFEDMGIEDELKLKVAVRLLESKARIWWETLKDRSYV-TLTWSDFVR 179
           A +A  W+K+V  T   + I   L++  A++LL   A  WWET++ R    TLTWSDF  
Sbjct: 12  AKIAGRWIKKVEKTMIQINIPVGLRVNDAIQLLSDWAMTWWETIQLRHATKTLTWSDFKL 71

Query: 180 EFDEEYYTWFHRDQKRQEYMRLIQGNKTVAEYETKLKDLANFVPEIVGSEEALCSKFEE 356
           EF+ ++Y+ +H   K QE++ L QG  T+ E E +  DL+ F P  V ++E +  K  +
Sbjct: 72  EFENQFYSRYHFKVKEQEFLALRQGEMTMLENERRFHDLSLFAPHYVPTKEHMIEKLRD 130


>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
           gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
           kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
           Group] gi|31431495|gb|AAP53268.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1230

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
 Frame = +3

Query: 12  AKEWLKRVLATFEDMGIEDELKLKVAVRLLESKARIWWETLKDRSY---VTLTWSDFVRE 182
           A+EW+  +  +FE MG  D+ K+  A  +L+S A  WW+  K +SY   + +TW  F   
Sbjct: 91  AEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHK-KSYSERIFITWELFKEA 149

Query: 183 FDEEYYTWFHRDQKRQEYMRLIQGNKTVAEYETKLKDLANFVPEIVGSEEALCSKFE 353
           F ++Y+    +  K +E++ L QGNK+VAEYE +   LA F PE V ++ +   +FE
Sbjct: 150 FYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFAPEFVQTDGSKARRFE 206


>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
           gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
           Japonica Group]
          Length = 443

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
 Frame = +3

Query: 12  AKEWLKRVLATFEDMGIEDELKLKVAVRLLESKARIWWETLKDRSY---VTLTWSDFVRE 182
           A+EW+  +  +FE MG  D+ K+  A  +L+S A  WW+  K +SY   + +TW  F   
Sbjct: 179 AEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHK-KSYSERIFITWELFKEA 237

Query: 183 FDEEYYTWFHRDQKRQEYMRLIQGNKTVAEYETKLKDLANFVPEIVGSEEALCSKFE 353
           F ++Y+    +  K +E++ L QGNK+VAEYE +   LA F PE V ++ +   +FE
Sbjct: 238 FYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFAPEFVQTDGSKARRFE 294


>emb|CAN61575.1| hypothetical protein VITISV_014037 [Vitis vinifera]
          Length = 503

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   AMVAKEWLKRVLATFEDMGIEDELKLKVAVRLLESKARIWWETLKDRSYVT--LTWSDFV 176
           A   + WL+R+      + I +E ++ +A  +L  KA  WWE++K R Y T  +TW +F 
Sbjct: 91  AEATEHWLRRMRRILVGLDIPEERRVGLATYMLVDKADFWWESMK-RVYDTEVMTWEEFE 149

Query: 177 REFDEEYYTWFHRDQKRQEYMRLIQGNKTVAEYETKLKDLANFVPEIVGSEEALCSKFEE 356
           R F  +Y+    +  KR E+  LIQG  +V EYE++  +L+ F   ++G E     +F++
Sbjct: 150 RIFLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFSELSRFALGMIGEEGEKARRFQQ 209


>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
          Length = 871

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
 Frame = +3

Query: 12  AKEWLKRVLATFEDMGIEDELKLKVAVRLLESKARIWWETLKDR---SYVTLTWSDFVRE 182
           A+ WL  +   F  M   ++ K++ AV +L  +   WWET +         +TW  F   
Sbjct: 353 AQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKES 412

Query: 183 FDEEYYTWFHRDQKRQEYMRLIQGNKTVAEYETKLKDLANFVPEIVGSEEALCSKF 350
           F  ++++   RD KRQE++ L QG+ TV +Y+ +   L+ F PE++ +E A   KF
Sbjct: 413 FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKF 468


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