BLASTX nr result

ID: Dioscorea21_contig00029239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029239
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vit...   108   4e-22
ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Rici...   106   2e-21
ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like...   105   5e-21
ref|XP_003523278.1| PREDICTED: RING-H2 finger protein ATL72-like...   105   5e-21
ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Rici...   103   1e-20

>ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera]
           gi|147769463|emb|CAN70348.1| hypothetical protein
           VITISV_012580 [Vitis vinifera]
           gi|297736494|emb|CBI25365.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  108 bits (270), Expect = 4e-22
 Identities = 56/81 (69%), Positives = 58/81 (71%)
 Frame = +1

Query: 1   NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180
           NMV              GLNSIVRCALRC RR+AFET +ETAARLA TGLKK ALRQIPV
Sbjct: 40  NMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETAARLAATGLKKSALRQIPV 99

Query: 181 AVYGPEAGILATDCPICLGEF 243
           AVYG    I ATDCPICLGEF
Sbjct: 100 AVYGSGTNIPATDCPICLGEF 120


>ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Ricinus communis]
           gi|223531856|gb|EEF33673.1| RING-H2 finger protein
           ATL5A, putative [Ricinus communis]
          Length = 186

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/83 (65%), Positives = 57/83 (68%)
 Frame = +1

Query: 1   NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180
           NMV              GLNSIVRCALRC  R + ETPE+TAARLA  GLKKR LRQIPV
Sbjct: 35  NMVIILAALLCALLGALGLNSIVRCALRCSSRFSLETPEQTAARLAAKGLKKRELRQIPV 94

Query: 181 AVYGPEAGILATDCPICLGEFAD 249
           AVYG E  I AT+CPICLGEF D
Sbjct: 95  AVYGTEVSIPATECPICLGEFLD 117


>ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 198

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/84 (65%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180
           NMV              GLNSIVRCALRC RR AFETPEETAARL   GLKK AL QIP+
Sbjct: 38  NMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPI 97

Query: 181 AVYGP-EAGILATDCPICLGEFAD 249
            VYG   A I ATDCPICLGEF D
Sbjct: 98  VVYGSGSASIAATDCPICLGEFVD 121


>ref|XP_003523278.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 216

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/84 (65%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180
           NMV              GLNSIVRCALRC RR AFETPEETAARL   GLKK AL QIP+
Sbjct: 38  NMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPI 97

Query: 181 AVYGP-EAGILATDCPICLGEFAD 249
            VYG   A I ATDCPICLGEF D
Sbjct: 98  VVYGSGSASIAATDCPICLGEFVD 121


>ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223539997|gb|EEF41575.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 208

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/84 (64%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180
           NMV              GLNSIVRCALRC RR AFETP+E AARLA TGLKK ALRQIPV
Sbjct: 42  NMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDEAAARLAATGLKKSALRQIPV 101

Query: 181 AVYGPEA-GILATDCPICLGEFAD 249
            +YG     I+ATDC ICLGEF+D
Sbjct: 102 VIYGAAGIQIIATDCAICLGEFSD 125


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