BLASTX nr result
ID: Dioscorea21_contig00029239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00029239 (250 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vit... 108 4e-22 ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Rici... 106 2e-21 ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like... 105 5e-21 ref|XP_003523278.1| PREDICTED: RING-H2 finger protein ATL72-like... 105 5e-21 ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Rici... 103 1e-20 >ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera] gi|147769463|emb|CAN70348.1| hypothetical protein VITISV_012580 [Vitis vinifera] gi|297736494|emb|CBI25365.3| unnamed protein product [Vitis vinifera] Length = 197 Score = 108 bits (270), Expect = 4e-22 Identities = 56/81 (69%), Positives = 58/81 (71%) Frame = +1 Query: 1 NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180 NMV GLNSIVRCALRC RR+AFET +ETAARLA TGLKK ALRQIPV Sbjct: 40 NMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETAARLAATGLKKSALRQIPV 99 Query: 181 AVYGPEAGILATDCPICLGEF 243 AVYG I ATDCPICLGEF Sbjct: 100 AVYGSGTNIPATDCPICLGEF 120 >ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Ricinus communis] gi|223531856|gb|EEF33673.1| RING-H2 finger protein ATL5A, putative [Ricinus communis] Length = 186 Score = 106 bits (264), Expect = 2e-21 Identities = 54/83 (65%), Positives = 57/83 (68%) Frame = +1 Query: 1 NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180 NMV GLNSIVRCALRC R + ETPE+TAARLA GLKKR LRQIPV Sbjct: 35 NMVIILAALLCALLGALGLNSIVRCALRCSSRFSLETPEQTAARLAAKGLKKRELRQIPV 94 Query: 181 AVYGPEAGILATDCPICLGEFAD 249 AVYG E I AT+CPICLGEF D Sbjct: 95 AVYGTEVSIPATECPICLGEFLD 117 >ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max] Length = 198 Score = 105 bits (261), Expect = 5e-21 Identities = 55/84 (65%), Positives = 56/84 (66%), Gaps = 1/84 (1%) Frame = +1 Query: 1 NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180 NMV GLNSIVRCALRC RR AFETPEETAARL GLKK AL QIP+ Sbjct: 38 NMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPI 97 Query: 181 AVYGP-EAGILATDCPICLGEFAD 249 VYG A I ATDCPICLGEF D Sbjct: 98 VVYGSGSASIAATDCPICLGEFVD 121 >ref|XP_003523278.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max] Length = 216 Score = 105 bits (261), Expect = 5e-21 Identities = 55/84 (65%), Positives = 56/84 (66%), Gaps = 1/84 (1%) Frame = +1 Query: 1 NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180 NMV GLNSIVRCALRC RR AFETPEETAARL GLKK AL QIP+ Sbjct: 38 NMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPI 97 Query: 181 AVYGP-EAGILATDCPICLGEFAD 249 VYG A I ATDCPICLGEF D Sbjct: 98 VVYGSGSASIAATDCPICLGEFVD 121 >ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Ricinus communis] gi|223539997|gb|EEF41575.1| RING-H2 finger protein ATL3C, putative [Ricinus communis] Length = 208 Score = 103 bits (257), Expect = 1e-20 Identities = 54/84 (64%), Positives = 58/84 (69%), Gaps = 1/84 (1%) Frame = +1 Query: 1 NMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALRQIPV 180 NMV GLNSIVRCALRC RR AFETP+E AARLA TGLKK ALRQIPV Sbjct: 42 NMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDEAAARLAATGLKKSALRQIPV 101 Query: 181 AVYGPEA-GILATDCPICLGEFAD 249 +YG I+ATDC ICLGEF+D Sbjct: 102 VIYGAAGIQIIATDCAICLGEFSD 125