BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029236
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   244   5e-63
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   232   3e-59
ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-59
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   226   2e-57
ref|XP_002868248.1| pentatricopeptide repeat-containing protein ...   217   1e-54

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
            [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
            protein product [Vitis vinifera]
          Length = 727

 Score =  244 bits (624), Expect = 5e-63
 Identities = 118/187 (63%), Positives = 144/187 (77%)
 Frame = +2

Query: 2    DLLCRAKLLHEAFELIESMPFRPNVIIWGSLLGGCRVHMDVELGEIAAKRILELDPDHDG 181
            DL  RA LL EA EL+E+MP  PNVIIWGSL+  CRVH ++ELGE AAKR+LELDPDHDG
Sbjct: 500  DLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDG 559

Query: 182  AYVLLSNIYAKANKWDEVGRVRRLMKSRGVSKEKGCSWLEINGNVHEFLMGDESHLKSKE 361
            A+V LSNIYAKA +W++VG+VR+LMK +G+SKE+GCS  E+N  +HEFL+ D SH  + E
Sbjct: 560  AHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADE 619

Query: 362  IYGKLEEIIQELVLVGYSPDTGSVLVDLXXXXXXXAVLLHSEKLALSFGLINTTRGSCIR 541
            IY KL E++ +L LVGYSP+T S+LVDL        VL HSEKLAL +GL+    GSCIR
Sbjct: 620  IYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIR 679

Query: 542  IAKNLRV 562
            I KNLRV
Sbjct: 680  IIKNLRV 686


>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like
            [Glycine max]
          Length = 721

 Score =  232 bits (592), Expect = 3e-59
 Identities = 112/187 (59%), Positives = 138/187 (73%)
 Frame = +2

Query: 2    DLLCRAKLLHEAFELIESMPFRPNVIIWGSLLGGCRVHMDVELGEIAAKRILELDPDHDG 181
            DL CRA  L +A ELIE+MPF PNVIIWGSL+  C+ H ++ELGE AA R+LEL+PDHDG
Sbjct: 494  DLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDG 553

Query: 182  AYVLLSNIYAKANKWDEVGRVRRLMKSRGVSKEKGCSWLEINGNVHEFLMGDESHLKSKE 361
            A V+LSNIYAK  +WD+VG VR+LMK +GVSKEK CS +E+N  VH F+M D  H +S E
Sbjct: 554  ALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDE 613

Query: 362  IYGKLEEIIQELVLVGYSPDTGSVLVDLXXXXXXXAVLLHSEKLALSFGLINTTRGSCIR 541
            IY KL+ ++ +L LVGY+P T  +LVDL        VL HSEKLAL +GLI   + SCIR
Sbjct: 614  IYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIR 673

Query: 542  IAKNLRV 562
            I KNLR+
Sbjct: 674  IVKNLRI 680


>ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|222864804|gb|EEF01935.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  231 bits (589), Expect = 6e-59
 Identities = 109/187 (58%), Positives = 143/187 (76%)
 Frame = +2

Query: 2   DLLCRAKLLHEAFELIESMPFRPNVIIWGSLLGGCRVHMDVELGEIAAKRILELDPDHDG 181
           DL  RA LL +A EL+E+MP  PNV+IWGSL+  C++H + ELGE AAK++LEL+PDHDG
Sbjct: 225 DLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDG 284

Query: 182 AYVLLSNIYAKANKWDEVGRVRRLMKSRGVSKEKGCSWLEINGNVHEFLMGDESHLKSKE 361
           A V LSNIYAK  +W +VG +R LMK RG+SKE+GCS +E+N  V+EF+M D+ H ++ +
Sbjct: 285 ALVQLSNIYAKDRRWQDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADK 344

Query: 362 IYGKLEEIIQELVLVGYSPDTGSVLVDLXXXXXXXAVLLHSEKLALSFGLINTTRGSCIR 541
           IY KL+E+++EL LVGY+P+T SVLVD+        VL HSEKLAL +GL+   +GSCIR
Sbjct: 345 IYEKLDEVVKELKLVGYTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIR 404

Query: 542 IAKNLRV 562
           I KNLRV
Sbjct: 405 IVKNLRV 411


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512069|gb|AES93692.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  226 bits (576), Expect = 2e-57
 Identities = 108/187 (57%), Positives = 136/187 (72%)
 Frame = +2

Query: 2    DLLCRAKLLHEAFELIESMPFRPNVIIWGSLLGGCRVHMDVELGEIAAKRILELDPDHDG 181
            DL CRA  L +A ELIE+MPF PNVIIWGSL+  C+VH + ELGE AAKR+LEL+PDHDG
Sbjct: 499  DLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDG 558

Query: 182  AYVLLSNIYAKANKWDEVGRVRRLMKSRGVSKEKGCSWLEINGNVHEFLMGDESHLKSKE 361
            A V+LSNIYAK  +W++VG +R+ M  +G+SKEK  S +EIN  VH F+M D  H +S E
Sbjct: 559  ALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDE 618

Query: 362  IYGKLEEIIQELVLVGYSPDTGSVLVDLXXXXXXXAVLLHSEKLALSFGLINTTRGSCIR 541
            IY KL+E++ +L LVGY P T  +L+DL        VL HSEKLA+ +GLI+    SCIR
Sbjct: 619  IYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIR 678

Query: 542  IAKNLRV 562
            I KNLR+
Sbjct: 679  IVKNLRI 685


>ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297314084|gb|EFH44507.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 725

 Score =  217 bits (552), Expect = 1e-54
 Identities = 113/193 (58%), Positives = 140/193 (72%), Gaps = 6/193 (3%)
 Frame = +2

Query: 2    DLLCRAKLLHEAFELIESMPFRPNVIIWGSLLGGCRVHMDVELGEIAAKRILELDPDHDG 181
            DL  RA LL EA E+IESMP  PNV+IWGSL+  CRVH ++ELGE+AAKRIL+L+PDHDG
Sbjct: 492  DLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDG 551

Query: 182  AYVLLSNIYAKANKWDEVGRVRRLMKSRGVSKEKGCSWLEINGNVHEFLMGDESHLKSKE 361
            A VL+SNIYA+  +WD V  +R +M+ + V KEKG S +++NG  HEFL+GD+ H +S E
Sbjct: 552  ALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNE 611

Query: 362  IYGKLEEIIQELVLVGYSPDTGSVLVDLXXXXXXXAVLLHSEKLALSFGLIN----TTRG 529
            IY KL E++ +L L GY PD GSVLVD+        VL HSEKLAL FGL+N      +G
Sbjct: 612  IYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKG 671

Query: 530  SC--IRIAKNLRV 562
            SC  IRI KNLRV
Sbjct: 672  SCGVIRIVKNLRV 684