BLASTX nr result
ID: Dioscorea21_contig00029232
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00029232 (214 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004157117.1| PREDICTED: niemann-Pick C1 protein-like [Cuc... 119 2e-25 ref|XP_004145542.1| PREDICTED: niemann-Pick C1 protein-like [Cuc... 119 2e-25 ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Gly... 119 3e-25 ref|XP_002307793.1| cholesterol transport protein [Populus trich... 116 2e-24 ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit... 115 3e-24 >ref|XP_004157117.1| PREDICTED: niemann-Pick C1 protein-like [Cucumis sativus] Length = 1296 Score = 119 bits (299), Expect = 2e-25 Identities = 56/71 (78%), Positives = 69/71 (97%) Frame = -2 Query: 213 HIWKTAVVNIAIGLGAVFVVCLVITCSLWTSSIILMVLAMIIVDMMGVMALLEIQLNAVS 34 +IW+TA++N+AI +GAVF+VCL+ITCSLWTS+IIL+VLAMIIVD+MGVMA+L IQLNA+S Sbjct: 1118 NIWRTALINLAIAIGAVFIVCLIITCSLWTSAIILLVLAMIIVDLMGVMAILNIQLNAIS 1177 Query: 33 VVNLVMSVGIA 1 VVNLVMSVGIA Sbjct: 1178 VVNLVMSVGIA 1188 >ref|XP_004145542.1| PREDICTED: niemann-Pick C1 protein-like [Cucumis sativus] Length = 1244 Score = 119 bits (299), Expect = 2e-25 Identities = 56/71 (78%), Positives = 69/71 (97%) Frame = -2 Query: 213 HIWKTAVVNIAIGLGAVFVVCLVITCSLWTSSIILMVLAMIIVDMMGVMALLEIQLNAVS 34 +IW+TA++N+AI +GAVF+VCL+ITCSLWTS+IIL+VLAMIIVD+MGVMA+L IQLNA+S Sbjct: 1066 NIWRTALINLAIAIGAVFIVCLIITCSLWTSAIILLVLAMIIVDLMGVMAILNIQLNAIS 1125 Query: 33 VVNLVMSVGIA 1 VVNLVMSVGIA Sbjct: 1126 VVNLVMSVGIA 1136 >ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max] Length = 1257 Score = 119 bits (297), Expect = 3e-25 Identities = 58/71 (81%), Positives = 68/71 (95%) Frame = -2 Query: 213 HIWKTAVVNIAIGLGAVFVVCLVITCSLWTSSIILMVLAMIIVDMMGVMALLEIQLNAVS 34 HIWKTA+VN+AI +GAVF+VCLVIT SLW+SSIIL+VLAMI+VD+MGVMA+L IQLNA+S Sbjct: 1081 HIWKTALVNLAIAIGAVFIVCLVITSSLWSSSIILLVLAMIVVDLMGVMAILNIQLNALS 1140 Query: 33 VVNLVMSVGIA 1 VVNLVMSVGIA Sbjct: 1141 VVNLVMSVGIA 1151 >ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa] gi|222857242|gb|EEE94789.1| cholesterol transport protein [Populus trichocarpa] Length = 1274 Score = 116 bits (291), Expect = 2e-24 Identities = 56/69 (81%), Positives = 66/69 (95%) Frame = -2 Query: 210 IWKTAVVNIAIGLGAVFVVCLVITCSLWTSSIILMVLAMIIVDMMGVMALLEIQLNAVSV 31 IW+TA++N+AI +GAVFVVCLVITCSLW S+IIL+VLAMI+VD+MGVMA+L IQLNAVSV Sbjct: 1097 IWRTALINLAIAIGAVFVVCLVITCSLWNSAIILLVLAMIVVDLMGVMAILNIQLNAVSV 1156 Query: 30 VNLVMSVGI 4 VNLVMSVGI Sbjct: 1157 VNLVMSVGI 1165 >ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera] Length = 1309 Score = 115 bits (289), Expect = 3e-24 Identities = 54/70 (77%), Positives = 68/70 (97%) Frame = -2 Query: 210 IWKTAVVNIAIGLGAVFVVCLVITCSLWTSSIILMVLAMIIVDMMGVMALLEIQLNAVSV 31 IW+TA++N+AI +GAVF+VCLVITCSLW+S+IIL+VLAMI+VD+MGVMA+L IQLNA+SV Sbjct: 1132 IWRTALINLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVMAILNIQLNALSV 1191 Query: 30 VNLVMSVGIA 1 VNLVM+VGIA Sbjct: 1192 VNLVMAVGIA 1201