BLASTX nr result

ID: Dioscorea21_contig00029173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029173
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK98741.1|AC090485_20 Hypothetical protein similar to putati...    67   4e-09
ref|XP_003606192.1| 3-ketoacyl-CoA synthase [Medicago truncatula...    64   2e-08
ref|XP_002440608.1| hypothetical protein SORBIDRAFT_09g003970 [S...    62   1e-07
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   3e-07
ref|XP_002465612.1| hypothetical protein SORBIDRAFT_01g042140 [S...    60   3e-07

>gb|AAK98741.1|AC090485_20 Hypothetical protein similar to putative retroelements [Oryza
           sativa Japonica Group] gi|27497213|gb|AAO17357.1|
           Putative retroelement [Oryza sativa Japonica Group]
           gi|108706160|gb|ABF93955.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
           gi|125584905|gb|EAZ25569.1| hypothetical protein
           OsJ_09395 [Oryza sativa Japonica Group]
          Length = 387

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 37/142 (26%), Positives = 66/142 (46%)
 Frame = +2

Query: 26  WEGWSNIWKLRVAPKVKTFIWLLNHGKIKTYEYLYRLNLGPPVPWVFCGLVLETTDHIFR 205
           W  WS IW+    P+VK F WL++  ++ T   L++  + P      C   LE T HIF 
Sbjct: 223 WPPWSAIWRSAAPPRVKFFAWLMSKNRLPTRVNLHKKTILPTPTCELCNANLEDTYHIFL 282

Query: 206 QCRISISVWRMVQDLANTKINLVDLINRDIWLDIYSHGNSLFLASIIAVTLWQIWISRCN 385
           +C ++ + W M+Q +     +L DL N    L++     +   ++   +  W++W  R  
Sbjct: 283 RCPMAAAFWNMIQIIPEIS-SLSDLHN----LELSGPLPTFLSSTFFLLCCWRLWNHRNE 337

Query: 386 FIFK*ERIDIDMIANRIIMEVK 451
            +F+     I  + N  + + K
Sbjct: 338 VVFQNLPPSISRLINSCLQDAK 359


>ref|XP_003606192.1| 3-ketoacyl-CoA synthase [Medicago truncatula]
           gi|355507247|gb|AES88389.1| 3-ketoacyl-CoA synthase
           [Medicago truncatula]
          Length = 468

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
 Frame = +2

Query: 35  WSNIWKLRVAPKVKTFIWLLNHGKIKTYEYLYRLNLGPPVPWVFCGLVLETTDHIFRQCR 214
           W  +WKL V  +V++F+WL+ H ++ T   L R+++G P  +  CG  +ETT H+ R C 
Sbjct: 67  WDQVWKLHVPERVRSFVWLIKHDRLMTCSRLNRMHIGNPY-YHHCGDAIETTLHVLRDCP 125

Query: 215 ISISVWRMVQDLA-NTKINLVDL-------INRDIWLDIY 310
           ++ +VW    +L   T     DL       +NR  W + +
Sbjct: 126 LAEAVWLNSFELQFRTNFYTTDLRDWIEQNLNRKRWAEFW 165


>ref|XP_002440608.1| hypothetical protein SORBIDRAFT_09g003970 [Sorghum bicolor]
            gi|241945893|gb|EES19038.1| hypothetical protein
            SORBIDRAFT_09g003970 [Sorghum bicolor]
          Length = 938

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
 Frame = +2

Query: 32   GWSNIWKLRVAPKVKTFIWLLNHGKIKTYEYLYRLNLGPPVPWVFCGLVLETTDHIFRQC 211
            G   +W+ +  PKVK F WL  HG++ T     R  L        CG   ET+DH+   C
Sbjct: 776  GARELWQTKAPPKVKFFFWLALHGRLWTAARRARHGLQQSAVCSLCGQQDETSDHLLLAC 835

Query: 212  RISISVWRMVQDLANTKINL--VDLINRDIWLD----IYSHGNSLFLASIIAVTLWQIWI 373
              S  VW  +  +AN + +    D I  D WL     I++    LF  SI+ +  W+IW 
Sbjct: 836  VYSREVWFRLLSIANLQQHAPGTDDILVDWWLQTRSIIHTDVRKLF-DSIVLLVTWEIWK 894

Query: 374  SRCNFIFK*ERIDIDMIANRIIMEVKEF 457
             R    F        ++  RI  E++ +
Sbjct: 895  ERNRRTFDGAHRSCSLLLTRIQEEMESW 922


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
 Frame = +2

Query: 35   WSNIWKLRVAPKVKTFIWLLNHGKIKTYEYLYRLNLGPPVPWVFCGLVLETTDHIFRQCR 214
            WS +WK+    +V+ FIWL    ++ T    +   L      + CG V E TDHI R+C 
Sbjct: 1044 WSAVWKIPTPQRVRFFIWLAIQDRLMTNSNRFLRRLTDDPRCLVCGEVEENTDHILRRCP 1103

Query: 215  ISISVWR---MVQDLANTKINLVDLINRDIWLDIYSHGNSLFLASIIAVTLWQIWISRCN 385
            ++  +WR   M+ +    +INL   I +++  D       L    + AV+ W +W  R +
Sbjct: 1104 VARILWRKLGMLGEHNREEINLGSWITKNLSADTMMGSEWL---RVFAVSCWWLWRWRND 1160

Query: 386  FIF-K*ERIDIDMIANRIIMEVKE 454
              F +   I ID + + I   VKE
Sbjct: 1161 RCFNRNPSIPIDQV-SFIFARVKE 1183


>ref|XP_002465612.1| hypothetical protein SORBIDRAFT_01g042140 [Sorghum bicolor]
            gi|241919466|gb|EER92610.1| hypothetical protein
            SORBIDRAFT_01g042140 [Sorghum bicolor]
          Length = 742

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
 Frame = +2

Query: 32   GWSNIWKLRVAPKVKTFIWLLNHGKIKTYEYLYRLNLGPPVPWVFCGLVLETTDHIFRQC 211
            G S +W+ +  PKVK F WL  HG++ T     R  L        CG   ET+DH+   C
Sbjct: 580  GASELWQTKAPPKVKFFFWLALHGRLWTAARRARHGLQQTAVCSLCGQQDETSDHLLLAC 639

Query: 212  RISISVWRMVQDLANTKINL--VDLINRDIWLD----IYSHGNSLFLASIIAVTLWQIWI 373
              S  VW  +  +AN + +    D    D WL+    I++     F  SI+ +  W+IW 
Sbjct: 640  VYSREVWFRLLSIANLQQHAPGTDDTLADWWLETSSIIHTDVRKSF-DSIVLLVTWEIWK 698

Query: 374  SRCNFIFK*ERIDIDMIANRIIMEVKEF 457
             R    F        ++  RI  E++ +
Sbjct: 699  ERNRRTFDGAHRSNSLLLKRIQEEMESW 726


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