BLASTX nr result

ID: Dioscorea21_contig00029153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029153
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADO00337.1| RING protein [Elaeis guineensis]                       120   2e-25
ref|XP_002527484.1| conserved hypothetical protein [Ricinus comm...   101   2e-19
ref|XP_002262757.1| PREDICTED: uncharacterized protein LOC100249...   100   4e-19
emb|CAN60716.1| hypothetical protein VITISV_034287 [Vitis vinifera]   100   4e-19
gb|AFW89286.1| putative RING zinc finger domain superfamily prot...   100   5e-19

>gb|ADO00337.1| RING protein [Elaeis guineensis]
          Length = 281

 Score =  120 bits (302), Expect = 2e-25
 Identities = 68/148 (45%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
 Frame = +1

Query: 1   GASLTRSRF---GSGVPSILWDEIEADDDLSIIGTEIWEPWNASEWSAPGRHLASVASEA 171
           G SLT SR    GSG+ S    E+   +D  I  +  WE     EW   G     +  +A
Sbjct: 139 GISLTGSRLTTTGSGISS---GELAVSNDFIISNSADWESETPGEWFESGVPYRDLTHDA 195

Query: 172 NQEYIPQSP-RKKPPGLTSEAICSLNHETFKEAEHDESMEFLECSICLDKFQEGDVLFRL 348
              Y  Q+  +KKPPGL+ EAICSL  E FK AE   ++   ECSICL+KF EGD L +L
Sbjct: 196 EDVYSLQNVCKKKPPGLSWEAICSLQLEVFKYAEKGGTLP--ECSICLEKFLEGDELIQL 253

Query: 349 YCRHRFHCICLEPWLRSCGDCPNCRNTV 432
            C HRFH  CLEPW+ +CGDCP CR ++
Sbjct: 254 CCGHRFHFTCLEPWVWACGDCPYCRASI 281


>ref|XP_002527484.1| conserved hypothetical protein [Ricinus communis]
           gi|223533124|gb|EEF34882.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score =  101 bits (251), Expect = 2e-19
 Identities = 61/157 (38%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
 Frame = +1

Query: 1   GASLTRSRFGSGVPSILWD-EIEADDDLSIIGTEIWEPWNASEWSAPGRHLA-SVASEAN 174
           G SL+ +R  S     ++D E    DDL I+ T  W    A   S+ G     S+ +   
Sbjct: 126 GVSLSGNRRSSRASFGIYDREFTFGDDLRIVDTGDWRTDIAPGRSSRGTSFTESIYTTER 185

Query: 175 QEYIPQSPRKKPPGLTSEAICSLNHETF----KEAEHDESMEFLECSICLDKFQEGDVLF 342
            +   +S +KKPPGLT E +  L  E F    K  E   S    +CSICL+ F++GD L 
Sbjct: 186 LQLAEESYKKKPPGLTPEDLECLQLEIFSSWEKGVEGIVSQASWDCSICLESFKDGDKLI 245

Query: 343 RLYCRHRFHCICLEPWLRSCGDCPNCRNTVKTSVSSA 453
            L C HRFH  CL+PW+R+CGDCP CR  +  S  S+
Sbjct: 246 CLPCNHRFHSSCLDPWVRTCGDCPYCRRDIAVSSRSS 282


>ref|XP_002262757.1| PREDICTED: uncharacterized protein LOC100249808 [Vitis vinifera]
           gi|296083083|emb|CBI22487.3| unnamed protein product
           [Vitis vinifera]
          Length = 278

 Score =  100 bits (248), Expect = 4e-19
 Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
 Frame = +1

Query: 55  DEIEADDDLSIIGTEIWEPWNASEWSAPGRHLASVASEANQEYIPQSP-RKKPPGLTSEA 231
           D+    DD  +I    W    ++ W   G   + + SE     + + P +KKPPGLT EA
Sbjct: 149 DDFTFGDDFRLIDVGDW----STGWLTGGTPSSDLNSETMLPPLMREPSKKKPPGLTQEA 204

Query: 232 ICSLNHETFKEAEHDES---MEFLECSICLDKFQEGDVLFRLYCRHRFHCICLEPWLRSC 402
           + SL+   F  AE  E        +CSICLD ++EGD L  L C H+FH  CL+PW+R+C
Sbjct: 205 LDSLHRAVFSRAEGAEEGMPRASRDCSICLDGYREGDKLTCLPCGHKFHSACLDPWVRTC 264

Query: 403 GDCPNCRNTVKTS 441
           GDCP CR+ +  S
Sbjct: 265 GDCPYCRSVIDIS 277


>emb|CAN60716.1| hypothetical protein VITISV_034287 [Vitis vinifera]
          Length = 688

 Score =  100 bits (248), Expect = 4e-19
 Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
 Frame = +1

Query: 55  DEIEADDDLSIIGTEIWEPWNASEWSAPGRHLASVASEANQEYIPQSP-RKKPPGLTSEA 231
           D+    DD  +I    W    ++ W   G   + + SE     + + P +KKPPGLT EA
Sbjct: 167 DDFTFGDDFRLIDVGDW----STGWLTGGTPSSDLNSETMLPPLMREPSKKKPPGLTQEA 222

Query: 232 ICSLNHETFKEAEHDES---MEFLECSICLDKFQEGDVLFRLYCRHRFHCICLEPWLRSC 402
           + SL+   F  AE  E        +CSICLD ++EGD L  L C H+FH  CL+PW+R+C
Sbjct: 223 LDSLHRAVFSRAEGAEEGMPRASRDCSICLDGYREGDKLTCLPCGHKFHSACLDPWVRTC 282

Query: 403 GDCPNCRNTVKTS 441
           GDCP CR+ +  S
Sbjct: 283 GDCPYCRSVIDIS 295


>gb|AFW89286.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 272

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
 Frame = +1

Query: 40  PSILWDEIEADDDLSIIGTEIWEPWNASEWSAPGRHLASVASEANQEY--IPQSPRKKPP 213
           PSI  DE  A+D   II     E W+  E + P      + SE+++E   +      +  
Sbjct: 138 PSISLDEFSANDVFRIIDFRNRETWH--EANRPHSSSFHLGSESDEERPNVSSVNSNRST 195

Query: 214 GLTSEAICSLNHETFKEAEHDESMEFLECSICLDKFQEGDVLFRLYCRHRFHCICLEPWL 393
           GL+  A   L  E F+ ++ D      ECSICLD F +GD L RL+C HRFH  CLEPW+
Sbjct: 196 GLSKAAFLRLQIEIFEASKDDNREASPECSICLDGFYDGDELIRLHCGHRFHSTCLEPWV 255

Query: 394 RSCGDCPNCRNTVKT 438
           R C DCP CR  +++
Sbjct: 256 RKCSDCPYCRTNIRS 270