BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029151
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sati...   117   8e-25
ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group] g...   117   8e-25
ref|XP_002533488.1| pentatricopeptide repeat-containing protein,...   117   8e-25

>ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
           gi|449528041|ref|XP_004171015.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  121 bits (304), Expect = 5e-26
 Identities = 54/85 (63%), Positives = 71/85 (83%)
 Frame = +3

Query: 6   IGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCV 185
           +G+QIH + V+MG D+DV+TGSA+VDMYAKC  L DSL  F+E+P+KNW++WSAAIAGCV
Sbjct: 175 LGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCV 234

Query: 186 QNDEHVEGLQMFVSMQREGPAVSQS 260
           QND+ + GL++F  MQR+G  VSQS
Sbjct: 235 QNDQLLRGLKLFKEMQRKGIGVSQS 259



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 25/77 (32%), Positives = 49/77 (63%)
 Frame = +3

Query: 6   IGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCV 185
           +G Q+HC  +K     DV+ G+A +DMYAKC  + D+ + F+ +P+ N  +++A I G  
Sbjct: 276 LGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYA 335

Query: 186 QNDEHVEGLQMFVSMQR 236
           +N++  +  ++F+ +Q+
Sbjct: 336 RNEQGFQAFKLFLQLQK 352



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = +3

Query: 6   IGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCV 185
           +G QIH  ++K+ L  DV   S +VDMY+KC  + DSL  F + P+++ VTW+A I G  
Sbjct: 579 LGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFA 638

Query: 186 QNDEHVEGLQMFVSMQRE 239
            +    E L++F  M  E
Sbjct: 639 YHGLGEEALELFEHMLHE 656



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/76 (35%), Positives = 45/76 (59%)
 Frame = +3

Query: 9   GVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCVQ 188
           G+Q+H L +K  L  ++   +A++DMY KC  L ++   F+EM  ++ V+W+A I  C Q
Sbjct: 378 GLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQ 437

Query: 189 NDEHVEGLQMFVSMQR 236
           N+   + L  F +M R
Sbjct: 438 NESEGKTLSHFGAMLR 453


>ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|222873711|gb|EEF10842.1|
           predicted protein [Populus trichocarpa]
          Length = 897

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/86 (66%), Positives = 69/86 (80%)
 Frame = +3

Query: 3   EIGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGC 182
           ++GVQ+H LVVK G D DV+TGSA++ MYAKCK L DSL  F+E+PEKNWV+WSA IAGC
Sbjct: 198 DMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGC 257

Query: 183 VQNDEHVEGLQMFVSMQREGPAVSQS 260
           VQND +VEGL++F  MQ  G  VSQS
Sbjct: 258 VQNDRNVEGLELFKEMQGVGVGVSQS 283



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/76 (39%), Positives = 45/76 (59%)
 Frame = +3

Query: 6   IGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCV 185
           +G QIH  ++K  L  DV   S +VDMY+KC  + DS   F + P +++VTW+A + G  
Sbjct: 603 LGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYA 662

Query: 186 QNDEHVEGLQMFVSMQ 233
            +    E L++F SMQ
Sbjct: 663 HHGLGEEALKLFESMQ 678



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = +3

Query: 9   GVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCVQ 188
           G Q+H L VK     ++   +A++DMY KCK L ++   F+ M  ++ V+W+A IA C Q
Sbjct: 402 GRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQ 461

Query: 189 NDEHVEGLQMFVSM 230
           N    E L  F SM
Sbjct: 462 NGNEEETLAHFASM 475


>gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
           gi|31433484|gb|AAP54989.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 905

 Score =  117 bits (294), Expect = 8e-25
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = +3

Query: 6   IGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCV 185
           +GVQ+H L VK GL+ DV TGSA+VDMY KC+ L D+L FF  MPE+NWV+W AAIAGCV
Sbjct: 209 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 268

Query: 186 QNDEHVEGLQMFVSMQREGPAVSQ 257
           QN+++V GL++F+ MQR G  VSQ
Sbjct: 269 QNEQYVRGLELFIEMQRLGLGVSQ 292



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = +3

Query: 9   GVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCVQ 188
           G Q+HCL +K G D D+   +AV+D+Y KCK L ++   F  M +K+ V+W+A IA   Q
Sbjct: 412 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 471

Query: 189 NDEHVEGLQMFVSMQREG 242
           N  + + +  F  M R G
Sbjct: 472 NGHYDDTILHFNEMLRFG 489



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/79 (40%), Positives = 49/79 (62%)
 Frame = +3

Query: 3   EIGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGC 182
           E+G QIH  ++K  +  D    S +VDMYAKC  + DSL  F ++ ++++V+W+A I G 
Sbjct: 612 ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGY 671

Query: 183 VQNDEHVEGLQMFVSMQRE 239
             +   VE L+MF  MQ+E
Sbjct: 672 ALHGLGVEALRMFERMQKE 690


>ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
           gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa
           Japonica Group]
          Length = 863

 Score =  117 bits (294), Expect = 8e-25
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = +3

Query: 6   IGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCV 185
           +GVQ+H L VK GL+ DV TGSA+VDMY KC+ L D+L FF  MPE+NWV+W AAIAGCV
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226

Query: 186 QNDEHVEGLQMFVSMQREGPAVSQ 257
           QN+++V GL++F+ MQR G  VSQ
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQ 250



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = +3

Query: 9   GVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCVQ 188
           G Q+HCL +K G D D+   +AV+D+Y KCK L ++   F  M +K+ V+W+A IA   Q
Sbjct: 370 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429

Query: 189 NDEHVEGLQMFVSMQREG 242
           N  + + +  F  M R G
Sbjct: 430 NGHYDDTILHFNEMLRFG 447



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/79 (40%), Positives = 49/79 (62%)
 Frame = +3

Query: 3   EIGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGC 182
           E+G QIH  ++K  +  D    S +VDMYAKC  + DSL  F ++ ++++V+W+A I G 
Sbjct: 570 ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGY 629

Query: 183 VQNDEHVEGLQMFVSMQRE 239
             +   VE L+MF  MQ+E
Sbjct: 630 ALHGLGVEALRMFERMQKE 648


>ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526650|gb|EEF28892.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 939

 Score =  117 bits (294), Expect = 8e-25
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +3

Query: 6   IGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCV 185
           +G+Q+H L+V+MG   DV+TGSA++DMYAKCK L DSL+ F+E+P KNWV WSA IAGCV
Sbjct: 194 LGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCV 253

Query: 186 QNDEHVEGLQMFVSMQREGPAVSQS 260
           QNDEH+ GL++F  MQ+ G  VSQS
Sbjct: 254 QNDEHILGLELFKEMQKVGIGVSQS 278



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/80 (36%), Positives = 48/80 (60%)
 Frame = +3

Query: 3   EIGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGC 182
           ++G Q+H   +K     D+  G+A +DMYAKC  L D+ + FN +P+ +   ++A I GC
Sbjct: 294 KVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGC 353

Query: 183 VQNDEHVEGLQMFVSMQREG 242
           V+N++  E LQ F  + + G
Sbjct: 354 VRNEKGFEALQFFQLLLKSG 373



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/78 (42%), Positives = 45/78 (57%)
 Frame = +3

Query: 6   IGVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCV 185
           +G QIH  ++K+ L  DV   S +VDMY+KC  + DS   F + P K++VTW+A I G  
Sbjct: 598 LGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYA 657

Query: 186 QNDEHVEGLQMFVSMQRE 239
           Q+    E L  F  MQ E
Sbjct: 658 QHGLGEEALGYFERMQLE 675



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/76 (38%), Positives = 45/76 (59%)
 Frame = +3

Query: 9   GVQIHCLVVKMGLDFDVMTGSAVVDMYAKCKCLCDSLQFFNEMPEKNWVTWSAAIAGCVQ 188
           G Q+H L VK  L  ++   ++++DMY KC+ L ++   F+EM  ++ V+W+A IA   Q
Sbjct: 397 GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQ 456

Query: 189 NDEHVEGLQMFVSMQR 236
           N    E L +F SM R
Sbjct: 457 NGNEEETLNLFASMLR 472