BLASTX nr result

ID: Dioscorea21_contig00029122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029122
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   167   8e-40
ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic su...   167   8e-40
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   166   1e-39
ref|XP_002515746.1| DNA polymerase delta catalytic subunit, puta...   162   3e-38
ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glyc...   160   8e-38

>ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
           subunit-like [Cucumis sativus]
          Length = 573

 Score =  167 bits (423), Expect = 8e-40
 Identities = 75/96 (78%), Positives = 83/96 (86%)
 Frame = +2

Query: 2   LSRWKRPPLISSFTPSSNSIVFQQLEIDYVISESHKELLPNSFGPAAILRIFGVTREGHS 181
           +S+W RPPL   +   S SIVFQQLEIDYVI ESHKELLPN  GPAAILRIFGVTREGHS
Sbjct: 65  ISKWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGPAAILRIFGVTREGHS 124

Query: 182 VCCHIHGFEPYFYISCPAGMGPDDVSMFQQTLEGRM 289
           VCCH+HGFEPYFYISCP+GMGPDD+S+F +TLE RM
Sbjct: 125 VCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARM 160


>ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
           sativus]
          Length = 1086

 Score =  167 bits (423), Expect = 8e-40
 Identities = 75/96 (78%), Positives = 83/96 (86%)
 Frame = +2

Query: 2   LSRWKRPPLISSFTPSSNSIVFQQLEIDYVISESHKELLPNSFGPAAILRIFGVTREGHS 181
           +S+W RPPL   +   S SIVFQQLEIDYVI ESHKELLPN  GPAAILRIFGVTREGHS
Sbjct: 65  ISKWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGPAAILRIFGVTREGHS 124

Query: 182 VCCHIHGFEPYFYISCPAGMGPDDVSMFQQTLEGRM 289
           VCCH+HGFEPYFYISCP+GMGPDD+S+F +TLE RM
Sbjct: 125 VCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARM 160


>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
           gi|296088521|emb|CBI37512.3| unnamed protein product
           [Vitis vinifera]
          Length = 1089

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/96 (79%), Positives = 84/96 (87%)
 Frame = +2

Query: 2   LSRWKRPPLISSFTPSSNSIVFQQLEIDYVISESHKELLPNSFGPAAILRIFGVTREGHS 181
           LS+W RPPL S++  SS SIVFQQLEIDYVI ESHKEL+PNS G AAI+RIFGVTREGHS
Sbjct: 68  LSKWARPPLSSAYLSSSQSIVFQQLEIDYVIGESHKELMPNSSGSAAIIRIFGVTREGHS 127

Query: 182 VCCHIHGFEPYFYISCPAGMGPDDVSMFQQTLEGRM 289
           VCC++HGFEPYFYISCP GMGPDD+S F Q LEGRM
Sbjct: 128 VCCNVHGFEPYFYISCPPGMGPDDISRFHQVLEGRM 163


>ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
           gi|223545183|gb|EEF46693.1| DNA polymerase delta
           catalytic subunit, putative [Ricinus communis]
          Length = 1049

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/96 (76%), Positives = 84/96 (87%)
 Frame = +2

Query: 2   LSRWKRPPLISSFTPSSNSIVFQQLEIDYVISESHKELLPNSFGPAAILRIFGVTREGHS 181
           LSRW RPPL  ++   S SI+FQQLEIDYVI ES++ELLP+  GPAAI+RIFGVTREGHS
Sbjct: 71  LSRWARPPLSHAYLSQSQSIIFQQLEIDYVIGESNRELLPDRSGPAAIIRIFGVTREGHS 130

Query: 182 VCCHIHGFEPYFYISCPAGMGPDDVSMFQQTLEGRM 289
           VCC++HGFEPYFYISCP+GMGPDD+S FQQ LEGRM
Sbjct: 131 VCCNVHGFEPYFYISCPSGMGPDDISSFQQILEGRM 166


>ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
           gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA
           polymerase delta catalytic subunit
           gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine
           max]
          Length = 1088

 Score =  160 bits (406), Expect = 8e-38
 Identities = 71/96 (73%), Positives = 82/96 (85%)
 Frame = +2

Query: 2   LSRWKRPPLISSFTPSSNSIVFQQLEIDYVISESHKELLPNSFGPAAILRIFGVTREGHS 181
           LS+W RPPL + +   S S++FQQLEIDYVI+ESH ELLPNS GP AI+RIFGVT+EGHS
Sbjct: 41  LSKWTRPPLSAGYVAQSRSVLFQQLEIDYVIAESHGELLPNSSGPVAIIRIFGVTKEGHS 100

Query: 182 VCCHIHGFEPYFYISCPAGMGPDDVSMFQQTLEGRM 289
           VCC++HGFEPYFYI CP GMGPDD+S F QTLEGRM
Sbjct: 101 VCCNVHGFEPYFYICCPPGMGPDDISHFHQTLEGRM 136


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