BLASTX nr result

ID: Dioscorea21_contig00029121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029121
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001177077.1| Os12g0635400 [Oryza sativa Japonica Group] g...    60   1e-07
gb|EAY84023.1| hypothetical protein OsI_39255 [Oryza sativa Indi...    60   1e-07
dbj|BAK08227.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   4e-07
dbj|BAK00863.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   4e-07
ref|XP_003575762.1| PREDICTED: uncharacterized protein LOC100832...    59   5e-07

>ref|NP_001177077.1| Os12g0635400 [Oryza sativa Japonica Group]
           gi|255670515|dbj|BAH95805.1| Os12g0635400 [Oryza sativa
           Japonica Group]
          Length = 111

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 5/45 (11%)
 Frame = -3

Query: 121 IHTVRKPPSKPWRR-----PEPAPAKVYRVEPRGFRQLVQRLTGS 2
           +  V+KPP+KPWR      P PAP KVYRVEPR FR LVQRLTG+
Sbjct: 17  LRAVQKPPAKPWRASPSAAPGPAPPKVYRVEPREFRDLVQRLTGA 61


>gb|EAY84023.1| hypothetical protein OsI_39255 [Oryza sativa Indica Group]
          Length = 111

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 5/45 (11%)
 Frame = -3

Query: 121 IHTVRKPPSKPWRR-----PEPAPAKVYRVEPRGFRQLVQRLTGS 2
           +  V+KPP+KPWR      P PAP KVYRVEPR FR LVQRLTG+
Sbjct: 17  LRAVQKPPAKPWRASPSAAPGPAPPKVYRVEPREFRDLVQRLTGA 61


>dbj|BAK08227.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 128

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 7/47 (14%)
 Frame = -3

Query: 121 IHTVRKPPSKPWRR-------PEPAPAKVYRVEPRGFRQLVQRLTGS 2
           + +V+KPP+KPWR        P P P KVYRVEPR FR LVQRLTG+
Sbjct: 22  LRSVQKPPAKPWRAGGGLTPAPAPTPPKVYRVEPREFRDLVQRLTGA 68


>dbj|BAK00863.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 128

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 7/47 (14%)
 Frame = -3

Query: 121 IHTVRKPPSKPWRR-------PEPAPAKVYRVEPRGFRQLVQRLTGS 2
           + +V+KPP+KPWR        P P P KVYRVEPR FR LVQRLTG+
Sbjct: 22  LRSVQKPPAKPWRAGGGLTPAPAPTPPKVYRVEPREFRDLVQRLTGA 68


>ref|XP_003575762.1| PREDICTED: uncharacterized protein LOC100832884 [Brachypodium
           distachyon]
          Length = 137

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 8/48 (16%)
 Frame = -3

Query: 121 IHTVRKPPSKPWRR--------PEPAPAKVYRVEPRGFRQLVQRLTGS 2
           +  V+KPP+KPWR         P PAP +VYRVEPR FR LVQRLTG+
Sbjct: 27  LRAVQKPPAKPWRAAASSSSSSPAPAPPRVYRVEPREFRDLVQRLTGA 74


Top