BLASTX nr result

ID: Dioscorea21_contig00029104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029104
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...   154   7e-36
gb|ABI34329.1| Integrase core domain containing protein [Solanum...   154   7e-36
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]               150   1e-34
emb|CAN71185.1| hypothetical protein VITISV_014270 [Vitis vinifera]   147   9e-34
emb|CAN84135.1| hypothetical protein VITISV_000113 [Vitis vinifera]   147   1e-33

>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score =  154 bits (389), Expect = 7e-36
 Identities = 70/141 (49%), Positives = 100/141 (70%)
 Frame = -3

Query: 424  RQSIVDVLKTFILEVQNQFSTVLKCLRTDNALEFVSSAVNSLCASFGIIHQTTCPHTSQQ 245
            R  ++ +  +F  E++NQF   +K  R+DNA E+ S  ++S  +S GIIHQ+TCPHT QQ
Sbjct: 680  RSELLPIFVSFYNEIENQFGKTIKIFRSDNAKEYFSHDLSSFLSSKGIIHQSTCPHTPQQ 739

Query: 244  NGVAERKHRHILDVARTLLVERNVPRYLWSDAILTAVYLINRMPSAPLGGEVPLRRLLPD 65
            NG+AERK+RH+L+ AR+L++  NVP + W DA+LTA +LINRMPS+ L  ++P   + P 
Sbjct: 740  NGIAERKNRHLLETARSLMLNSNVPTHHWGDAVLTACFLINRMPSSSLENQIPHSIVFPH 799

Query: 64   TELFRLSPRVFGCVGFVQDLT 2
              LF +SP+VFGC  FV DL+
Sbjct: 800  DPLFHVSPKVFGCTCFVHDLS 820


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score =  154 bits (389), Expect = 7e-36
 Identities = 72/140 (51%), Positives = 96/140 (68%)
 Frame = -3

Query: 424  RQSIVDVLKTFILEVQNQFSTVLKCLRTDNALEFVSSAVNSLCASFGIIHQTTCPHTSQQ 245
            R  +  + K+F  E+QNQF   ++  R+DNALE++SS         GIIHQTTCP+T QQ
Sbjct: 581  RSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFREFMTHQGIIHQTTCPYTPQQ 640

Query: 244  NGVAERKHRHILDVARTLLVERNVPRYLWSDAILTAVYLINRMPSAPLGGEVPLRRLLPD 65
            NGVAERK+RH+++ ARTLL+E NVP   W DA+LT+ YLINRMPS+ +  +VP   L P 
Sbjct: 641  NGVAERKNRHLIETARTLLLESNVPLRFWGDAVLTSCYLINRMPSSSIQNQVPHSILFPQ 700

Query: 64   TELFRLSPRVFGCVGFVQDL 5
            + L+ + PRVFG   FV +L
Sbjct: 701  SHLYPIPPRVFGSTCFVHNL 720


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/140 (49%), Positives = 97/140 (69%)
 Frame = -3

Query: 424 RQSIVDVLKTFILEVQNQFSTVLKCLRTDNALEFVSSAVNSLCASFGIIHQTTCPHTSQQ 245
           R  +  + K+F  E+QNQF   ++  R+DNALE++SS      +  GIIHQT+CP+T QQ
Sbjct: 342 RSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFQEFMSHQGIIHQTSCPYTPQQ 401

Query: 244 NGVAERKHRHILDVARTLLVERNVPRYLWSDAILTAVYLINRMPSAPLGGEVPLRRLLPD 65
           NGVAERK+RH+++ ARTLL+E +VP   W DA+L++ YLINRMPS+ +  +VP   L P 
Sbjct: 402 NGVAERKNRHLIETARTLLIESHVPLRFWGDAVLSSCYLINRMPSSSIQNQVPHSILFPQ 461

Query: 64  TELFRLSPRVFGCVGFVQDL 5
           + L+ + PRVFG   FV +L
Sbjct: 462 SHLYPIPPRVFGSTCFVHNL 481


>emb|CAN71185.1| hypothetical protein VITISV_014270 [Vitis vinifera]
          Length = 1024

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/141 (49%), Positives = 95/141 (67%)
 Frame = -3

Query: 424 RQSIVDVLKTFILEVQNQFSTVLKCLRTDNALEFVSSAVNSLCASFGIIHQTTCPHTSQQ 245
           R  +  + + F  E+Q QF+  ++ LR+DNA E+ S+   S  +  GI+HQ++C HT QQ
Sbjct: 269 RAELFSIFQKFYXEIQTQFNISIRVLRSDNAREYFSAPFTSFMSHHGILHQSSCAHTPQQ 328

Query: 244 NGVAERKHRHILDVARTLLVERNVPRYLWSDAILTAVYLINRMPSAPLGGEVPLRRLLPD 65
           NGVAERK+RH+++ ART+L+  NVP   W DA+LTA YLINRMPS+ L  ++P   L PD
Sbjct: 329 NGVAERKNRHLVETARTILLHGNVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPD 388

Query: 64  TELFRLSPRVFGCVGFVQDLT 2
             L+ L PRVFGC  FV  LT
Sbjct: 389 QPLYFLPPRVFGCTCFVHILT 409


>emb|CAN84135.1| hypothetical protein VITISV_000113 [Vitis vinifera]
          Length = 1323

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/141 (50%), Positives = 95/141 (67%)
 Frame = -3

Query: 424 RQSIVDVLKTFILEVQNQFSTVLKCLRTDNALEFVSSAVNSLCASFGIIHQTTCPHTSQQ 245
           R  +  + + F  E+Q QF+  ++ LR+DNA E+ S+   S  +  GI+HQ++C HT QQ
Sbjct: 510 RAELFSIFQKFYTEIQTQFNISIRVLRSDNAREYFSAQFTSFMSHHGILHQSSCAHTPQQ 569

Query: 244 NGVAERKHRHILDVARTLLVERNVPRYLWSDAILTAVYLINRMPSAPLGGEVPLRRLLPD 65
           NGVAERK+RH+++ ARTLL+  +VP   W DAILTA YLINRMPS+ L  ++P   L PD
Sbjct: 570 NGVAERKNRHLVETARTLLLHSHVPFRFWGDAILTACYLINRMPSSVLHDQIPHSLLFPD 629

Query: 64  TELFRLSPRVFGCVGFVQDLT 2
             L+ L PRVFGC  FV  LT
Sbjct: 630 QPLYFLPPRVFGCTCFVHILT 650


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