BLASTX nr result

ID: Dioscorea21_contig00029102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029102
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568137.1| PREDICTED: putative rRNA methylase ytqB-like...   284   9e-75
dbj|BAK06347.1| predicted protein [Hordeum vulgare subsp. vulgare]    283   2e-74
ref|NP_001056017.1| Os05g0511700 [Oryza sativa Japonica Group] g...   281   6e-74
ref|XP_002513364.1| S-adenosylmethionine-dependent methyltransfe...   281   8e-74
ref|XP_002263914.2| PREDICTED: putative rRNA methylase ytqB [Vit...   280   1e-73

>ref|XP_003568137.1| PREDICTED: putative rRNA methylase ytqB-like [Brachypodium
           distachyon]
          Length = 261

 Score =  284 bits (727), Expect = 9e-75
 Identities = 138/210 (65%), Positives = 170/210 (80%)
 Frame = -2

Query: 646 AQDFPISATDGALVGFITGKSKVTELAHSVWGSLVQKGDTVVDATCGNGHDTLALLKMVA 467
           A     +  + A+VGF+TGK K TE+AHSVW S+V+KGDTVVDATCGNG+DT ALLKMVA
Sbjct: 52  ADPLAAAGVEEAVVGFVTGKRKATEVAHSVWRSIVRKGDTVVDATCGNGNDTFALLKMVA 111

Query: 466 NVSGRGCVYGMDIQQSAIENTSLLLKESVDEDERELVKFFLVCHSKMETVIPKDTSVRLI 287
           +  G+G VYGMDIQ SAI++TS  L+ +VD  E ELVK F VCHS+ME ++PKD+ VRL+
Sbjct: 112 DERGQGRVYGMDIQDSAIDSTSSFLEMAVDSHEMELVKLFSVCHSRMEDIVPKDSPVRLV 171

Query: 286 VFNLGYLPGGDKTIITMSTTTLMALQSASHILHSGGLISMVVYVGHPGGREELQTVESFA 107
            FNLGYLPGGDKTIIT+  TT +ALQ+AS I+ SGGLIS++VY+GH GGR+EL  VESFA
Sbjct: 172 AFNLGYLPGGDKTIITIPRTTELALQAASRIVSSGGLISVLVYIGHLGGRDELDIVESFA 231

Query: 106 SSLPTESWVTCKFEVSNRPTGPVLVLIFKK 17
           SSLP ++WV+CKFE+ NRP  PVLVL+ KK
Sbjct: 232 SSLPVDTWVSCKFEMINRPVAPVLVLLHKK 261


>dbj|BAK06347.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 259

 Score =  283 bits (724), Expect = 2e-74
 Identities = 135/204 (66%), Positives = 169/204 (82%)
 Frame = -2

Query: 628 SATDGALVGFITGKSKVTELAHSVWGSLVQKGDTVVDATCGNGHDTLALLKMVANVSGRG 449
           +  + A+VGF+TGK K TE+AH+VW S+V+KGDTVVDATCGNG+DT ALLKMV++ +GRG
Sbjct: 56  AGVEEAVVGFVTGKRKATEVAHAVWRSIVRKGDTVVDATCGNGNDTFALLKMVSDETGRG 115

Query: 448 CVYGMDIQQSAIENTSLLLKESVDEDERELVKFFLVCHSKMETVIPKDTSVRLIVFNLGY 269
            VYGMDIQ SAI+NTS  L  +VD  E+ELVK F +CHS+ME ++PK + VRL+ FNLGY
Sbjct: 116 RVYGMDIQDSAIDNTSSFLNMAVDTHEKELVKLFSICHSRMEDIVPKGSPVRLVAFNLGY 175

Query: 268 LPGGDKTIITMSTTTLMALQSASHILHSGGLISMVVYVGHPGGREELQTVESFASSLPTE 89
           LPGGDKTIIT+  TT +ALQ+AS I+ SGGLIS++VY+GH GGR+EL  VESFASSLP +
Sbjct: 176 LPGGDKTIITVPKTTELALQAASRIVSSGGLISVLVYIGHLGGRDELDIVESFASSLPVD 235

Query: 88  SWVTCKFEVSNRPTGPVLVLIFKK 17
           +WV+CKFE+ NRP  PVLVL+ KK
Sbjct: 236 TWVSCKFEMVNRPVAPVLVLLHKK 259


>ref|NP_001056017.1| Os05g0511700 [Oryza sativa Japonica Group]
           gi|113579568|dbj|BAF17931.1| Os05g0511700 [Oryza sativa
           Japonica Group] gi|218197087|gb|EEC79514.1| hypothetical
           protein OsI_20592 [Oryza sativa Indica Group]
           gi|222632196|gb|EEE64328.1| hypothetical protein
           OsJ_19168 [Oryza sativa Japonica Group]
          Length = 260

 Score =  281 bits (720), Expect = 6e-74
 Identities = 133/205 (64%), Positives = 170/205 (82%)
 Frame = -2

Query: 631 ISATDGALVGFITGKSKVTELAHSVWGSLVQKGDTVVDATCGNGHDTLALLKMVANVSGR 452
           ++  + A+VGF+TGK K TELAH+VW S+V+KGDTVVDATCGNG+DT A+LKMVA+   +
Sbjct: 56  VAGVEDAVVGFVTGKRKATELAHAVWRSIVRKGDTVVDATCGNGNDTFAMLKMVADERVQ 115

Query: 451 GCVYGMDIQQSAIENTSLLLKESVDEDERELVKFFLVCHSKMETVIPKDTSVRLIVFNLG 272
           G VYG+DIQ+SAI +TS  LK +V+  E ELVK F +CHS+ME V+PKD  VRL+ FNLG
Sbjct: 116 GRVYGLDIQESAIASTSSFLKMAVNSHELELVKLFTICHSRMEEVVPKDFPVRLVAFNLG 175

Query: 271 YLPGGDKTIITMSTTTLMALQSASHILHSGGLISMVVYVGHPGGREELQTVESFASSLPT 92
           YLPGGDKTIIT+  TT +ALQ+AS I+ SGGLIS++VY+GHPGGR+EL  VESFASSLP 
Sbjct: 176 YLPGGDKTIITVPKTTELALQAASSIVSSGGLISVLVYIGHPGGRDELDVVESFASSLPI 235

Query: 91  ESWVTCKFEVSNRPTGPVLVLIFKK 17
           ++W++CKFE+ NRP  PVL+L++KK
Sbjct: 236 DTWMSCKFEMLNRPAAPVLILLYKK 260


>ref|XP_002513364.1| S-adenosylmethionine-dependent methyltransferase, putative [Ricinus
           communis] gi|223547272|gb|EEF48767.1|
           S-adenosylmethionine-dependent methyltransferase,
           putative [Ricinus communis]
          Length = 286

 Score =  281 bits (719), Expect = 8e-74
 Identities = 130/208 (62%), Positives = 164/208 (78%)
 Frame = -2

Query: 640 DFPISATDGALVGFITGKSKVTELAHSVWGSLVQKGDTVVDATCGNGHDTLALLKMVANV 461
           D P S  +  LVG++ GK K TE+AH VW  ++QKGDTVVDATCGNGHDTLALLKMVA+ 
Sbjct: 59  DSPFSGLEDDLVGYVLGKKKATEVAHLVWKHVLQKGDTVVDATCGNGHDTLALLKMVADE 118

Query: 460 SGRGCVYGMDIQQSAIENTSLLLKESVDEDERELVKFFLVCHSKMETVIPKDTSVRLIVF 281
           SG G VYGMDIQ  A++NTS LL E+V  +E+ELVK F +CHS+ME ++P++T VRL+ F
Sbjct: 119 SGNGHVYGMDIQSDALDNTSSLLDETVTSEEKELVKLFSICHSRMEEIVPENTPVRLVAF 178

Query: 280 NLGYLPGGDKTIITMSTTTLMALQSASHILHSGGLISMVVYVGHPGGREELQTVESFASS 101
           NLGYLPGGDK I T+   TL+AL++A  +L  GGLIS+VVYVGHPGGREEL+TVE+FAS 
Sbjct: 179 NLGYLPGGDKAITTVPEKTLLALEAAKRVLMPGGLISLVVYVGHPGGREELETVETFASG 238

Query: 100 LPTESWVTCKFEVSNRPTGPVLVLIFKK 17
           LP + W+ CKF++ NRP  PV+  +FK+
Sbjct: 239 LPVDDWICCKFQMLNRPVAPVVAFLFKR 266


>ref|XP_002263914.2| PREDICTED: putative rRNA methylase ytqB [Vitis vinifera]
          Length = 215

 Score =  280 bits (717), Expect = 1e-73
 Identities = 131/212 (61%), Positives = 169/212 (79%)
 Frame = -2

Query: 652 SRAQDFPISATDGALVGFITGKSKVTELAHSVWGSLVQKGDTVVDATCGNGHDTLALLKM 473
           S + +   S  +  L+G+I GK K T +AH VW  +VQKGDTVVDATCGNG+DTLA+LKM
Sbjct: 4   SLSNNSTFSGMEDVLMGYIFGKEKATRVAHLVWKHVVQKGDTVVDATCGNGYDTLAMLKM 63

Query: 472 VANVSGRGCVYGMDIQQSAIENTSLLLKESVDEDERELVKFFLVCHSKMETVIPKDTSVR 293
           VA+ SGRGCVYGMDIQ+ A+ENTS LL ESV+  E+ELVK F +CHS+ME V+PK T++R
Sbjct: 64  VADGSGRGCVYGMDIQKDALENTSSLLNESVNPIEKELVKLFTICHSRMEEVVPKSTTLR 123

Query: 292 LIVFNLGYLPGGDKTIITMSTTTLMALQSASHILHSGGLISMVVYVGHPGGREELQTVES 113
           L+ FNLGYLPGGDK + T S TT++ALQ+A+ IL SGGLIS++VYVGHPGGR+EL+T+++
Sbjct: 124 LVAFNLGYLPGGDKEVTTTSATTILALQAATRILASGGLISLIVYVGHPGGRDELETIQA 183

Query: 112 FASSLPTESWVTCKFEVSNRPTGPVLVLIFKK 17
           FAS L  E WV  +F++ NRP  PVL+ +FK+
Sbjct: 184 FASELSVEDWVCSEFQMLNRPLAPVLIFLFKR 215


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